Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Gm21559-201ENSMUST00000220638 855 ntBASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Gm18032-201ENSMUST00000222541 538 ntBASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Gm8587-201ENSMUST00000076538 843 ntBASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf111Q99ML9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Gm11336-201ENSMUST00000118168 334 ntBASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf111Q99ML9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms