Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Gm37722-201ENSMUST00000193757 208 ntBASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga3Q91XY5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdhga3Q91XY5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdhga3Q91XY5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga3Q91XY5 Gm13836-201ENSMUST00000121159 501 ntBASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga3Q91XY5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms