Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim60Q8VI40 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim60Q8VI40 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Trim60Q8VI40 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim60Q8VI40 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim60Q8VI40 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim60Q8VI40 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim60Q8VI40 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Trim60Q8VI40 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim60Q8VI40 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim60Q8VI40 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim60Q8VI40 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Gm13559-201ENSMUST00000120476 863 ntBASIC16.57■□□□□ 0.24
Trim60Q8VI40 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.57■□□□□ 0.24
Trim60Q8VI40 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim60Q8VI40 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim60Q8VI40 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.56■□□□□ 0.24
Trim60Q8VI40 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim60Q8VI40 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Gm45058-201ENSMUST00000205810 766 ntBASIC16.56■□□□□ 0.24
Trim60Q8VI40 Gm18959-201ENSMUST00000208954 655 ntBASIC16.56■□□□□ 0.24
Trim60Q8VI40 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim60Q8VI40 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.55■□□□□ 0.24
Trim60Q8VI40 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Gm27389-201ENSMUST00000183622 195 ntBASIC16.55■□□□□ 0.24
Trim60Q8VI40 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms