Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Q8VDP2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Reep4-203ENSMUST00000226563 1444 ntBASIC15.7■□□□□ 0.1
Q8VDP2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Q8VDP2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.7■□□□□ 0.1
Q8VDP2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Q8VDP2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.7■□□□□ 0.1
Q8VDP2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.7■□□□□ 0.1
Q8VDP2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.7■□□□□ 0.1
Q8VDP2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Q8VDP2 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.7■□□□□ 0.1
Q8VDP2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Q8VDP2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q8VDP2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Q8VDP2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.69■□□□□ 0.1
Q8VDP2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Q8VDP2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Q8VDP2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Q8VDP2 Gm12933-201ENSMUST00000120203 872 ntBASIC15.69■□□□□ 0.1
Q8VDP2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.69■□□□□ 0.1
Q8VDP2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.69■□□□□ 0.1
Q8VDP2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q8VDP2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Q8VDP2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.68■□□□□ 0.1
Q8VDP2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.68■□□□□ 0.1
Q8VDP2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Q8VDP2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Q8VDP2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Q8VDP2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Q8VDP2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Q8VDP2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q8VDP2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Q8VDP2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.67■□□□□ 0.1
Q8VDP2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.67■□□□□ 0.1
Q8VDP2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q8VDP2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q8VDP2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Q8VDP2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.67■□□□□ 0.1
Q8VDP2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q8VDP2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q8VDP2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q8VDP2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.67■□□□□ 0.1
Q8VDP2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Q8VDP2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.67■□□□□ 0.1
Q8VDP2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms