Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna3Q8R4G9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Gm28659-201ENSMUST00000188013 759 ntBASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna3Q8R4G9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Gm7461-201ENSMUST00000058918 827 ntBASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna3Q8R4G9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Mir8098-201ENSMUST00000184011 137 ntBASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Gm5864-201ENSMUST00000202263 970 ntBASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna3Q8R4G9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Chrna3Q8R4G9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms