Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Gm6623-201ENSMUST00000173570 544 ntBASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Gm43884-201ENSMUST00000204251 559 ntBASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacnb1Q8R3Z5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Gm4806-201ENSMUST00000222704 1690 ntBASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Gm13059-201ENSMUST00000119881 398 ntBASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacnb1Q8R3Z5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cacnb1Q8R3Z5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cacnb1Q8R3Z5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Cacnb1Q8R3Z5 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Gm29518-201ENSMUST00000190858 372 ntBASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Gm37337-201ENSMUST00000192601 993 ntBASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Gm17808-201ENSMUST00000200859 894 ntBASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacnb1Q8R3Z5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cacnb1Q8R3Z5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms