Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Gm29518-201ENSMUST00000190858 372 ntBASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h2aaQ8CGP4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Gm6345-202ENSMUST00000180900 204 ntBASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Gm17808-201ENSMUST00000200859 894 ntBASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h2aaQ8CGP4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h2aaQ8CGP4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h2aaQ8CGP4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h2aaQ8CGP4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Hist1h2aaQ8CGP4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h2aaQ8CGP4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h2aaQ8CGP4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h2aaQ8CGP4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Hist1h2aaQ8CGP4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h2aaQ8CGP4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h2aaQ8CGP4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms