Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Suds3Q8BR65 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Suds3Q8BR65 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Suds3Q8BR65 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.49■□□□□ 0.23
Suds3Q8BR65 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.49■□□□□ 0.23
Suds3Q8BR65 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Suds3Q8BR65 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Suds3Q8BR65 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Suds3Q8BR65 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Gm44450-201ENSMUST00000199528 114 ntBASIC16.48■□□□□ 0.23
Suds3Q8BR65 Gm17808-201ENSMUST00000200859 894 ntBASIC16.48■□□□□ 0.23
Suds3Q8BR65 Gm18115-201ENSMUST00000221209 621 ntBASIC16.48■□□□□ 0.23
Suds3Q8BR65 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Suds3Q8BR65 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Gm11336-201ENSMUST00000118168 334 ntBASIC16.47■□□□□ 0.23
Suds3Q8BR65 Gm9013-201ENSMUST00000132939 882 ntBASIC16.47■□□□□ 0.23
Suds3Q8BR65 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Gm6623-201ENSMUST00000173570 544 ntBASIC16.47■□□□□ 0.23
Suds3Q8BR65 Gm37722-201ENSMUST00000193757 208 ntBASIC16.47■□□□□ 0.23
Suds3Q8BR65 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Suds3Q8BR65 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Gm29518-201ENSMUST00000190858 372 ntBASIC16.46■□□□□ 0.23
Suds3Q8BR65 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Suds3Q8BR65 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Suds3Q8BR65 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Mir770-201ENSMUST00000103252 94 ntBASIC16.45■□□□□ 0.22
Suds3Q8BR65 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Suds3Q8BR65 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms