Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.44■□□□□ 0.54
Prpf40bQ80W14 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.44■□□□□ 0.54
Prpf40bQ80W14 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Gm4535-201ENSMUST00000182274 558 ntBASIC18.43■□□□□ 0.54
Prpf40bQ80W14 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Gm10355-201ENSMUST00000097146 517 ntBASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf40bQ80W14 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf40bQ80W14 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf40bQ80W14 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Gm25745-201ENSMUST00000174945 133 ntBASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf40bQ80W14 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf40bQ80W14 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms