Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d21Q7TSG5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d21Q7TSG5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d21Q7TSG5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d21Q7TSG5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Gm7977-201ENSMUST00000193787 748 ntBASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d21Q7TSG5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Gm33142-201ENSMUST00000193913 867 ntBASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d21Q7TSG5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d21Q7TSG5 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Gm7284-201ENSMUST00000131667 944 ntBASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3d21Q7TSG5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.52■□□□□ 0.39
Sh3d21Q7TSG5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3d21Q7TSG5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3d21Q7TSG5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3d21Q7TSG5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3d21Q7TSG5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms