Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dhx40Q6PE54 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Gm43799-201ENSMUST00000201845 579 ntBASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Gm30025-201ENSMUST00000218555 728 ntBASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.81■□□□□ 0.44
Dhx40Q6PE54 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Gm7213-201ENSMUST00000215977 950 ntBASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Gm9987-201ENSMUST00000069768 567 ntBASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dhx40Q6PE54 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Dhx40Q6PE54 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dhx40Q6PE54 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms