Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.09□□□□□ -0.15
Hist1h3bP84228 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.09□□□□□ -0.15
Hist1h3bP84228 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hist1h3bP84228 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hist1h3bP84228 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.08□□□□□ -0.15
Hist1h3bP84228 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hist1h3bP84228 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Gm6659-201ENSMUST00000174752 547 ntBASIC14.08□□□□□ -0.16
Hist1h3bP84228 Gm6345-202ENSMUST00000180900 204 ntBASIC14.08□□□□□ -0.16
Hist1h3bP84228 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.08□□□□□ -0.16
Hist1h3bP84228 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.08□□□□□ -0.16
Hist1h3bP84228 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.08□□□□□ -0.16
Hist1h3bP84228 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.08□□□□□ -0.16
Hist1h3bP84228 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hist1h3bP84228 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Gm6623-201ENSMUST00000173570 544 ntBASIC14.07□□□□□ -0.16
Hist1h3bP84228 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hist1h3bP84228 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms