Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.34□□□□□ -0.43
Vamp3P63024 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Gm10418-201ENSMUST00000100943 576 ntBASIC12.34□□□□□ -0.43
Vamp3P63024 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.34□□□□□ -0.43
Vamp3P63024 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.34□□□□□ -0.43
Vamp3P63024 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vamp3P63024 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Vamp3P63024 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.34□□□□□ -0.43
Vamp3P63024 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp3P63024 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
Vamp3P63024 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Vamp3P63024 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Vamp3P63024 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Vamp3P63024 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vamp3P63024 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Vamp3P63024 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.33□□□□□ -0.44
Vamp3P63024 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Vamp3P63024 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.33□□□□□ -0.44
Vamp3P63024 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp3P63024 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Vamp3P63024 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.32□□□□□ -0.44
Vamp3P63024 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Vamp3P63024 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.32□□□□□ -0.44
Vamp3P63024 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Vamp3P63024 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vamp3P63024 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vamp3P63024 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp3P63024 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vamp3P63024 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp3P63024 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vamp3P63024 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp3P63024 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Vamp3P63024 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.31□□□□□ -0.44
Vamp3P63024 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp3P63024 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp3P63024 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp3P63024 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms