Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.58□□□□□ -0.39
Ctdsp1P58466 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ctdsp1P58466 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Gm15546-201ENSMUST00000122095 826 ntBASIC12.58□□□□□ -0.4
Ctdsp1P58466 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdsp1P58466 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.57□□□□□ -0.4
Ctdsp1P58466 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.57□□□□□ -0.4
Ctdsp1P58466 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdsp1P58466 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Mir7075-201ENSMUST00000184187 82 ntBASIC12.56□□□□□ -0.4
Ctdsp1P58466 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdsp1P58466 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Gm40848-201ENSMUST00000221998 324 ntBASIC12.55□□□□□ -0.4
Ctdsp1P58466 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ctdsp1P58466 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms