Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1aP50516 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Gm14701-201ENSMUST00000117156 348 ntBASIC19.18■□□□□ 0.66
Atp6v1aP50516 Gm15920-201ENSMUST00000118998 402 ntBASIC19.18■□□□□ 0.66
Atp6v1aP50516 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1aP50516 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.17■□□□□ 0.66
Atp6v1aP50516 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.17■□□□□ 0.66
Atp6v1aP50516 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1aP50516 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Atp6v1aP50516 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1aP50516 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.15■□□□□ 0.66
Atp6v1aP50516 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.15■□□□□ 0.66
Atp6v1aP50516 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.15■□□□□ 0.66
Atp6v1aP50516 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Atp6v1aP50516 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms