Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.31□□□□□ -0.28
Nkx2-1P50220 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-1P50220 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.3□□□□□ -0.28
Nkx2-1P50220 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-1P50220 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Gm13168-201ENSMUST00000121771 632 ntBASIC13.29□□□□□ -0.28
Nkx2-1P50220 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-1P50220 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.29□□□□□ -0.28
Nkx2-1P50220 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.29□□□□□ -0.28
Nkx2-1P50220 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.29□□□□□ -0.28
Nkx2-1P50220 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-1P50220 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.28□□□□□ -0.28
Nkx2-1P50220 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms