Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Sox18P43680 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.31■□□□□ 0.04
Sox18P43680 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC15.31■□□□□ 0.04
Sox18P43680 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.31■□□□□ 0.04
Sox18P43680 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sox18P43680 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sox18P43680 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Sox18P43680 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sox18P43680 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sox18P43680 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sox18P43680 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Sox18P43680 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.3■□□□□ 0.04
Sox18P43680 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sox18P43680 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Gm20949-201ENSMUST00000206478 952 ntBASIC15.3■□□□□ 0.04
Sox18P43680 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.3■□□□□ 0.04
Sox18P43680 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox18P43680 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox18P43680 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox18P43680 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox18P43680 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.29■□□□□ 0.04
Sox18P43680 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox18P43680 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.29■□□□□ 0.04
Sox18P43680 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Gm5745-201ENSMUST00000183748 313 ntBASIC15.29■□□□□ 0.04
Sox18P43680 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.29■□□□□ 0.04
Sox18P43680 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox18P43680 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox18P43680 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox18P43680 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.28■□□□□ 0.04
Sox18P43680 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Sox18P43680 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.28■□□□□ 0.04
Sox18P43680 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sox18P43680 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.28■□□□□ 0.04
Sox18P43680 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.28■□□□□ 0.04
Sox18P43680 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Sox18P43680 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox18P43680 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sox18P43680 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox18P43680 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sox18P43680 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox18P43680 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.27■□□□□ 0.04
Sox18P43680 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.27■□□□□ 0.04
Sox18P43680 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox18P43680 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms