Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nkx1-2P42580 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx1-2P42580 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx1-2P42580 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.72■□□□□ 0.75
Nkx1-2P42580 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx1-2P42580 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx1-2P42580 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx1-2P42580 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx1-2P42580 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Gm21559-201ENSMUST00000220638 855 ntBASIC19.71■□□□□ 0.75
Nkx1-2P42580 Gm8587-201ENSMUST00000076538 843 ntBASIC19.71■□□□□ 0.75
Nkx1-2P42580 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx1-2P42580 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Gm37722-201ENSMUST00000193757 208 ntBASIC19.7■□□□□ 0.74
Nkx1-2P42580 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.7■□□□□ 0.74
Nkx1-2P42580 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx1-2P42580 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.69■□□□□ 0.74
Nkx1-2P42580 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.69■□□□□ 0.74
Nkx1-2P42580 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.69■□□□□ 0.74
Nkx1-2P42580 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx1-2P42580 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.68■□□□□ 0.74
Nkx1-2P42580 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms