Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.81□□□□□ -0.2
Slc6a1P31648 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.81□□□□□ -0.2
Slc6a1P31648 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Slc6a1P31648 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.81□□□□□ -0.2
Slc6a1P31648 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Slc6a1P31648 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.81□□□□□ -0.2
Slc6a1P31648 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Slc6a1P31648 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.81□□□□□ -0.2
Slc6a1P31648 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.81□□□□□ -0.2
Slc6a1P31648 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.81□□□□□ -0.2
Slc6a1P31648 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.81□□□□□ -0.2
Slc6a1P31648 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc6a1P31648 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Slc6a1P31648 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 BC037039-201ENSMUST00000192003 2205 ntBASIC13.8□□□□□ -0.2
Slc6a1P31648 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Slc6a1P31648 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Slc6a1P31648 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Slc6a1P31648 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Gm715-201ENSMUST00000117865 831 ntBASIC13.8□□□□□ -0.2
Slc6a1P31648 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.8□□□□□ -0.2
Slc6a1P31648 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slc6a1P31648 Mir6982-201ENSMUST00000184354 68 ntBASIC13.8□□□□□ -0.2
Slc6a1P31648 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slc6a1P31648 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a1P31648 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.8□□□□□ -0.2
Slc6a1P31648 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.79□□□□□ -0.2
Slc6a1P31648 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a1P31648 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.79□□□□□ -0.2
Slc6a1P31648 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.79□□□□□ -0.2
Slc6a1P31648 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.79□□□□□ -0.2
Slc6a1P31648 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.79□□□□□ -0.2
Slc6a1P31648 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Slc6a1P31648 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.79□□□□□ -0.2
Slc6a1P31648 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a1P31648 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Slc6a1P31648 Phf7-203ENSMUST00000226565 1971 ntBASIC13.78□□□□□ -0.2
Slc6a1P31648 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.78□□□□□ -0.2
Slc6a1P31648 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a1P31648 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms