Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.97■□□□□ 0.15
Gja4P28235 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.97■□□□□ 0.15
Gja4P28235 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gja4P28235 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gja4P28235 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gja4P28235 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gja4P28235 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Gja4P28235 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Gja4P28235 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gja4P28235 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Gja4P28235 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.96■□□□□ 0.15
Gja4P28235 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.96■□□□□ 0.15
Gja4P28235 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Gja4P28235 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Gja4P28235 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gja4P28235 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gja4P28235 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.96■□□□□ 0.15
Gja4P28235 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gja4P28235 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Gja4P28235 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.96■□□□□ 0.15
Gja4P28235 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gja4P28235 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.96■□□□□ 0.15
Gja4P28235 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gja4P28235 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Gja4P28235 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Gja4P28235 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Gja4P28235 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.95■□□□□ 0.14
Gja4P28235 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Gja4P28235 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.95■□□□□ 0.14
Gja4P28235 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Gja4P28235 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Gja4P28235 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.95■□□□□ 0.14
Gja4P28235 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.95■□□□□ 0.14
Gja4P28235 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Gm15358-201ENSMUST00000119249 520 ntBASIC15.95■□□□□ 0.14
Gja4P28235 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.95■□□□□ 0.14
Gja4P28235 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Gja4P28235 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gja4P28235 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Gja4P28235 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.94■□□□□ 0.14
Gja4P28235 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.94■□□□□ 0.14
Gja4P28235 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.94■□□□□ 0.14
Gja4P28235 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Gm4899-201ENSMUST00000178708 719 ntBASIC15.94■□□□□ 0.14
Gja4P28235 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.94■□□□□ 0.14
Gja4P28235 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.94■□□□□ 0.14
Gja4P28235 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.94■□□□□ 0.14
Gja4P28235 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Gja4P28235 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Gja4P28235 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Gja4P28235 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gja4P28235 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Gja4P28235 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.93■□□□□ 0.14
Gja4P28235 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.93■□□□□ 0.14
Gja4P28235 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Gja4P28235 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gja4P28235 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.93■□□□□ 0.14
Gja4P28235 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.93■□□□□ 0.14
Gja4P28235 Gm27300-201ENSMUST00000184085 97 ntBASIC15.93■□□□□ 0.14
Gja4P28235 Gm27335-201ENSMUST00000184758 97 ntBASIC15.93■□□□□ 0.14
Gja4P28235 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.93■□□□□ 0.14
Gja4P28235 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Gja4P28235 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.93■□□□□ 0.14
Gja4P28235 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Gja4P28235 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms