Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Pde6bP23440 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pde6bP23440 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pde6bP23440 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6bP23440 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pde6bP23440 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pde6bP23440 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pde6bP23440 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Gm25990-201ENSMUST00000102440 86 ntBASIC17.44■□□□□ 0.38
Pde6bP23440 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.44■□□□□ 0.38
Pde6bP23440 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pde6bP23440 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.44■□□□□ 0.38
Pde6bP23440 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.44■□□□□ 0.38
Pde6bP23440 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.44■□□□□ 0.38
Pde6bP23440 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Pde6bP23440 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.44■□□□□ 0.38
Pde6bP23440 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pde6bP23440 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.44■□□□□ 0.38
Pde6bP23440 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6bP23440 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.43■□□□□ 0.38
Pde6bP23440 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pde6bP23440 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Gm13418-201ENSMUST00000119097 944 ntBASIC17.43■□□□□ 0.38
Pde6bP23440 Mir5126-201ENSMUST00000175513 77 ntBASIC17.43■□□□□ 0.38
Pde6bP23440 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.43■□□□□ 0.38
Pde6bP23440 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.43■□□□□ 0.38
Pde6bP23440 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.43■□□□□ 0.38
Pde6bP23440 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.43■□□□□ 0.38
Pde6bP23440 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pde6bP23440 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pde6bP23440 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6bP23440 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.42■□□□□ 0.38
Pde6bP23440 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pde6bP23440 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Pde6bP23440 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Pde6bP23440 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.42■□□□□ 0.38
Pde6bP23440 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.42■□□□□ 0.38
Pde6bP23440 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.42■□□□□ 0.38
Pde6bP23440 Gm7230-201ENSMUST00000173026 815 ntBASIC17.42■□□□□ 0.38
Pde6bP23440 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Pde6bP23440 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.42■□□□□ 0.38
Pde6bP23440 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.42■□□□□ 0.38
Pde6bP23440 Gm5364-201ENSMUST00000216789 889 ntBASIC17.42■□□□□ 0.38
Pde6bP23440 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.42■□□□□ 0.38
Pde6bP23440 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6bP23440 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pde6bP23440 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms