Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Gm13884-201ENSMUST00000118103 829 ntBASIC13.41□□□□□ -0.26
Hoxa3P02831 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.41□□□□□ -0.26
Hoxa3P02831 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.41□□□□□ -0.26
Hoxa3P02831 Rprl3-201ENSMUST00000157400 290 ntBASIC13.41□□□□□ -0.26
Hoxa3P02831 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.41□□□□□ -0.26
Hoxa3P02831 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.41□□□□□ -0.26
Hoxa3P02831 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hoxa3P02831 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Hoxa3P02831 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.41□□□□□ -0.26
Hoxa3P02831 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa3P02831 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Gm12644-201ENSMUST00000119935 606 ntBASIC13.4□□□□□ -0.26
Hoxa3P02831 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.4□□□□□ -0.26
Hoxa3P02831 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.4□□□□□ -0.26
Hoxa3P02831 Mzt1-203ENSMUST00000227948 952 ntBASIC13.4□□□□□ -0.26
Hoxa3P02831 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa3P02831 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxa3P02831 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Hoxa3P02831 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Hoxa3P02831 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxa3P02831 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hoxa3P02831 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxa3P02831 Gm28659-201ENSMUST00000188013 759 ntBASIC13.39□□□□□ -0.27
Hoxa3P02831 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxa3P02831 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Hoxa3P02831 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa3P02831 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.38□□□□□ -0.27
Hoxa3P02831 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.38□□□□□ -0.27
Hoxa3P02831 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.38□□□□□ -0.27
Hoxa3P02831 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms