Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 AV026068-213ENSMUST00000223675 1171 ntBASIC17.37■□□□□ 0.37
Clk2O35491 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clk2O35491 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Clk2O35491 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.36■□□□□ 0.37
Clk2O35491 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.36■□□□□ 0.37
Clk2O35491 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.36■□□□□ 0.37
Clk2O35491 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.36■□□□□ 0.37
Clk2O35491 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.36■□□□□ 0.37
Clk2O35491 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Clk2O35491 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Clk2O35491 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.36■□□□□ 0.37
Clk2O35491 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk2O35491 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.35■□□□□ 0.37
Clk2O35491 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Clk2O35491 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.35■□□□□ 0.37
Clk2O35491 Gm27525-201ENSMUST00000184465 107 ntBASIC17.35■□□□□ 0.37
Clk2O35491 Gm18206-201ENSMUST00000207027 926 ntBASIC17.35■□□□□ 0.37
Clk2O35491 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Clk2O35491 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Clk2O35491 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clk2O35491 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.35■□□□□ 0.37
Clk2O35491 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clk2O35491 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk2O35491 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clk2O35491 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.34■□□□□ 0.37
Clk2O35491 Gm7222-201ENSMUST00000117512 906 ntBASIC17.34■□□□□ 0.37
Clk2O35491 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.34■□□□□ 0.37
Clk2O35491 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.34■□□□□ 0.37
Clk2O35491 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.34■□□□□ 0.37
Clk2O35491 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clk2O35491 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk2O35491 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clk2O35491 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clk2O35491 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clk2O35491 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.33■□□□□ 0.36
Clk2O35491 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Clk2O35491 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.33■□□□□ 0.36
Clk2O35491 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Gm15590-201ENSMUST00000078419 552 ntBASIC17.33■□□□□ 0.36
Clk2O35491 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms