Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.45□□□□□ -0.26
Col6a4A2AX52 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col6a4A2AX52 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.45□□□□□ -0.26
Col6a4A2AX52 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a4A2AX52 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a4A2AX52 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Gm45747-201ENSMUST00000212203 999 ntBASIC13.43□□□□□ -0.26
Col6a4A2AX52 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a4A2AX52 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Gm44492-201ENSMUST00000197012 141 ntBASIC13.42□□□□□ -0.26
Col6a4A2AX52 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms