Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv3-5A0A140T8M6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
Igkv3-5A0A140T8M6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv3-5A0A140T8M6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Igkv3-5A0A140T8M6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv3-5A0A140T8M6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv3-5A0A140T8M6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm22240-201ENSMUST00000175225 82 ntBASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC10.08□□□□□ -0.8
Igkv3-5A0A140T8M6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Gfra2-202ENSMUST00000227633 1480 ntBASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Gm3375-201ENSMUST00000203929 796 ntBASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv3-5A0A140T8M6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv3-5A0A140T8M6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Igkv3-5A0A140T8M6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv3-5A0A140T8M6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv3-5A0A140T8M6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv3-5A0A140T8M6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv3-5A0A140T8M6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv3-5A0A140T8M6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv3-5A0A140T8M6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms