Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm37025-201ENSMUST00000195159 829 ntBASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm18025-201ENSMUST00000221733 862 ntBASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm13158-201ENSMUST00000122007 736 ntBASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm17661-201ENSMUST00000170317 270 ntBASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm43859-201ENSMUST00000200075 1412 ntBASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9d-4A0A0G2JG37 App-207ENSMUST00000227737 2827 ntBASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm12896-201ENSMUST00000118430 226 ntBASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm27000-201ENSMUST00000182943 842 ntBASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav9d-4A0A0G2JG37 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms