Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav8-1A0A075B641 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav8-1A0A075B641 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Trav8-1A0A075B641 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Gm2399-201ENSMUST00000104944 225 ntBASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms