Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav4n-4A0A075B615 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.63
Trav4n-4A0A075B615 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav4n-4A0A075B615 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav4n-4A0A075B615 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav4n-4A0A075B615 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Trav4n-4A0A075B615 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4n-4A0A075B615 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.13□□□□□ -0.63
Trav4n-4A0A075B615 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms