Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 MIR624-201ENST00000385217 97 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 MIR1302-3-201ENST00000408128 138 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 MIR1257-201ENST00000408490 117 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-447P-201ENST00000410293 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-1118P-201ENST00000410382 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-1076P-201ENST00000410397 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-355P-201ENST00000410427 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-791P-201ENST00000410467 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-705P-201ENST00000410601 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-1100P-201ENST00000410691 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-860P-201ENST00000410860 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-1217P-201ENST00000411276 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 Y_RNA.626-201ENST00000411288 95 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-785P-201ENST00000411324 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 MTND2P23-201ENST00000422990 651 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU7-102P-201ENST00000458948 62 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU6-327P-201ENST00000516270 127 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 SCARNA15-202ENST00000516881 127 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU7-156P-201ENST00000517214 74 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 MIR3152-201ENST00000579801 74 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 AC090897.1-201ENST00000580909 226 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 AC008608.1-201ENST00000603910 127 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 RNU2-4P-201ENST00000606190 192 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 U6.90-201ENST00000614007 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 U6.70-201ENST00000620287 104 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 MIR6841-201ENST00000637129 72 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 AL596211.1-201ENST00000569873 2277 ntBASIC0.16□□□□□ -2.38
CHTOPQ9Y3Y2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.162-201ENST00000363683 102 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 SNORD27-201ENST00000363981 72 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.350-201ENST00000365409 98 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-643P-201ENST00000384018 107 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-364P-201ENST00000384387 107 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.508-201ENST00000384502 114 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.571-201ENST00000384753 98 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-493P-201ENST00000391321 108 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 RNA5SP127-201ENST00000411051 133 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 SEPT7P4-201ENST00000437076 306 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.797-201ENST00000515977 94 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-1045P-201ENST00000516321 107 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 SCARNA15.1-201ENST00000516384 125 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 MIR4308-201ENST00000580634 81 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 AL162730.1-201ENST00000605734 292 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 AC062037.2-201ENST00000610137 73 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 AL662814.1-201ENST00000617364 121 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 AC021613.1-201ENST00000623880 111 ntBASIC0.15□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA22.1-201ENST00000362701 134 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.65-201ENST00000362846 100 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.75-201ENST00000362927 97 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.182-201ENST00000363880 111 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-923P-201ENST00000364753 107 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-275P-201ENST00000364910 107 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-597P-201ENST00000365620 102 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.477-201ENST00000384352 108 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU4-70P-201ENST00000384579 139 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA20-201ENST00000384662 132 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 MIR598-201ENST00000384868 97 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 SNORD93-201ENST00000408813 74 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNA5SP237-201ENST00000410414 113 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-893P-201ENST00000458841 100 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 AC108740.1-201ENST00000498629 225 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-1023P-201ENST00000516137 106 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU4-71P-201ENST00000516258 113 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.673-201ENST00000516306 88 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.680-201ENST00000516441 93 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU7-70P-201ENST00000516941 66 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-448P-201ENST00000517052 107 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 MRPS18CP4-201ENST00000535821 231 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 AC141846.1-201ENST00000568348 142 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 MIR3128-201ENST00000581957 66 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 MIR8066-201ENST00000617280 78 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 U4.1-201ENST00000620349 87 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 AL589743.1-201ENST00000551932 2712 ntBASIC0.14□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA25.7-201ENST00000364375 127 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 RNA5SP117-201ENST00000365294 118 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.435-201ENST00000384095 112 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 MIR489-201ENST00000384923 84 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 U8.15-201ENST00000390947 134 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-918P-201ENST00000391219 106 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 RNU4-83P-201ENST00000410863 133 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 RNU5E-9P-201ENST00000411164 104 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 AC096949.1-201ENST00000412047 152 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 AL118496.2-201ENST00000448300 230 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 snoU13.18-201ENST00000459483 104 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-1149P-201ENST00000516810 97 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-1258P-201ENST00000516911 111 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 RNA5SP94-201ENST00000516917 108 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-111P-201ENST00000517179 105 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 AP003327.1-201ENST00000529684 127 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms