Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 Y_RNA.353-201ENST00000365440 108 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6-342P-201ENST00000384521 104 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 SNORA67.5-201ENST00000391036 107 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6-482P-201ENST00000391068 107 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6-613P-201ENST00000410412 108 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 RNA5SP33-201ENST00000516687 98 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
R3HCC1Q9Y3T6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 RNA5SP327-201ENST00000362494 101 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 Y_RNA.291-201ENST00000364886 113 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 Y_RNA.346-201ENST00000365385 112 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6-1081P-201ENST00000384537 107 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 MT-TN-201ENST00000387400 73 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 RPS23P4-201ENST00000487908 423 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 MIR548AE2-201ENST00000583456 67 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 AL359881.1-201ENST00000602916 267 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 MIR6740-201ENST00000618268 113 ntBASIC1.72□□□□□ -2.13
R3HCC1Q9Y3T6 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
R3HCC1Q9Y3T6 SNORA67.6-201ENST00000391093 99 ntBASIC1.71□□□□□ -2.14
R3HCC1Q9Y3T6 MIR1270-201ENST00000459320 83 ntBASIC1.71□□□□□ -2.14
R3HCC1Q9Y3T6 MIR4264-201ENST00000583520 66 ntBASIC1.71□□□□□ -2.14
R3HCC1Q9Y3T6 AP000753.3-201ENST00000604083 169 ntBASIC1.71□□□□□ -2.14
R3HCC1Q9Y3T6 U6.95-201ENST00000636931 70 ntBASIC1.71□□□□□ -2.14
R3HCC1Q9Y3T6 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
R3HCC1Q9Y3T6 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
R3HCC1Q9Y3T6 SNORA18-201ENST00000384416 132 ntBASIC1.7□□□□□ -2.14
R3HCC1Q9Y3T6 RNU6-1237P-201ENST00000384777 107 ntBASIC1.7□□□□□ -2.14
R3HCC1Q9Y3T6 snoU13.2-201ENST00000459201 104 ntBASIC1.7□□□□□ -2.14
R3HCC1Q9Y3T6 SNORD79.1-201ENST00000516069 84 ntBASIC1.7□□□□□ -2.14
R3HCC1Q9Y3T6 uc_338.6-201ENST00000613544 171 ntBASIC1.7□□□□□ -2.14
R3HCC1Q9Y3T6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
R3HCC1Q9Y3T6 SNORA32-201ENST00000384072 121 ntBASIC1.69□□□□□ -2.14
R3HCC1Q9Y3T6 MIR588-201ENST00000384900 83 ntBASIC1.69□□□□□ -2.14
R3HCC1Q9Y3T6 RNU7-21P-201ENST00000459430 62 ntBASIC1.69□□□□□ -2.14
R3HCC1Q9Y3T6 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.69□□□□□ -2.14
R3HCC1Q9Y3T6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
R3HCC1Q9Y3T6 SNORA80D-201ENST00000384488 135 ntBASIC1.68□□□□□ -2.14
R3HCC1Q9Y3T6 AL591704.2-201ENST00000421658 181 ntBASIC1.68□□□□□ -2.14
R3HCC1Q9Y3T6 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
R3HCC1Q9Y3T6 SNORA70.22-201ENST00000517160 124 ntBASIC1.68□□□□□ -2.14
R3HCC1Q9Y3T6 MIR377-201ENST00000362145 69 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 Y_RNA.213-201ENST00000364178 111 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 RNU6-580P-201ENST00000365159 107 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 SNORD26-201ENST00000384147 75 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 RNU6-955P-201ENST00000410497 104 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 RNU4-69P-201ENST00000410677 143 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 RNU7-62P-201ENST00000458856 62 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 AC036111.3-201ENST00000526389 112 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 MIR4769-201ENST00000584126 77 ntBASIC1.67□□□□□ -2.14
R3HCC1Q9Y3T6 RNU6-1290P-201ENST00000362957 109 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 SNORA2B-201ENST00000384583 137 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 MIR548A1-201ENST00000385041 97 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 MIR563-201ENST00000385080 79 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 Y_RNA.649-201ENST00000459077 103 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 RNU7-6P-201ENST00000516845 62 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 AC023827.1-201ENST00000569247 97 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 MIR548AI-201ENST00000579940 88 ntBASIC1.66□□□□□ -2.14
R3HCC1Q9Y3T6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 Y_RNA.299-201ENST00000364973 94 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 MIR548A3-201ENST00000385297 97 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 RPS29P23-201ENST00000458635 123 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 RNU7-35P-201ENST00000517174 62 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 MTND5P34-201ENST00000568888 325 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 MIR3163-201ENST00000581592 73 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 AL670379.3-201ENST00000605040 251 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 AC087741.2-201ENST00000619415 172 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 AC008163.1-202ENST00000636004 2889 ntBASIC1.65□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
R3HCC1Q9Y3T6 SNORA25-201ENST00000384384 134 ntBASIC1.64□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.64□□□□□ -2.15
R3HCC1Q9Y3T6 MIR759-201ENST00000390224 91 ntBASIC1.64□□□□□ -2.15
R3HCC1Q9Y3T6 snoU13.21-201ENST00000459368 105 ntBASIC1.64□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-237P-201ENST00000515985 71 ntBASIC1.64□□□□□ -2.15
R3HCC1Q9Y3T6 AL662814.1-201ENST00000617364 121 ntBASIC1.64□□□□□ -2.15
R3HCC1Q9Y3T6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.64□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-1165P-201ENST00000410119 107 ntBASIC1.63□□□□□ -2.15
R3HCC1Q9Y3T6 RNU1-92P-201ENST00000517017 135 ntBASIC1.63□□□□□ -2.15
R3HCC1Q9Y3T6 AC141846.1-201ENST00000568348 142 ntBASIC1.63□□□□□ -2.15
R3HCC1Q9Y3T6 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
R3HCC1Q9Y3T6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 MIR30D-201ENST00000362283 70 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 SNORD113.3-201ENST00000364630 78 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-1144P-201ENST00000384247 104 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 MIR222-201ENST00000384992 110 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 RNA5SP237-201ENST00000410414 113 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-1064P-201ENST00000410626 104 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 MRPL35P3-201ENST00000421557 364 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 RNU7-90P-201ENST00000459216 62 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 RNU7-79P-201ENST00000516082 62 ntBASIC1.62□□□□□ -2.15
R3HCC1Q9Y3T6 RNA5SP458-201ENST00000516188 119 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms