Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 RNU6-664P-201ENST00000362381 107 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 RNU6-829P-201ENST00000363700 112 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 RNU6-53P-201ENST00000365367 106 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 SNORA24B-201ENST00000384176 131 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 RNU6-1165P-201ENST00000410119 107 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 HMGN2P3-201ENST00000433603 273 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 HMGN2P5-201ENST00000436882 273 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 RNU6-579P-201ENST00000516879 102 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 MIR3126-201ENST00000577443 74 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 MIR4738-201ENST00000579134 87 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 MIR5089-201ENST00000580047 84 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 TRDV1-202ENST00000621643 102 ntBASIC3.16□□□□□ -1.9
LHX6Q9UPM6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LHX6Q9UPM6 RNA5SP465-201ENST00000391195 109 ntBASIC3.15□□□□□ -1.91
LHX6Q9UPM6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.15□□□□□ -1.91
LHX6Q9UPM6 RNVU1-4-201ENST00000612985 164 ntBASIC3.15□□□□□ -1.91
LHX6Q9UPM6 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.15□□□□□ -1.91
LHX6Q9UPM6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LHX6Q9UPM6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
LHX6Q9UPM6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LHX6Q9UPM6 MIR519A1-201ENST00000385257 85 ntBASIC3.14□□□□□ -1.91
LHX6Q9UPM6 MT-TF-201ENST00000387314 71 ntBASIC3.14□□□□□ -1.91
LHX6Q9UPM6 RNU6-604P-201ENST00000390917 100 ntBASIC3.14□□□□□ -1.91
LHX6Q9UPM6 RNA5SP184-201ENST00000411071 108 ntBASIC3.14□□□□□ -1.91
LHX6Q9UPM6 RNU6-322P-201ENST00000516010 103 ntBASIC3.14□□□□□ -1.91
LHX6Q9UPM6 SNORA9.3-201ENST00000516383 129 ntBASIC3.14□□□□□ -1.91
LHX6Q9UPM6 MIR4696-201ENST00000581431 70 ntBASIC3.14□□□□□ -1.91
LHX6Q9UPM6 MIR4264-201ENST00000583520 66 ntBASIC3.14□□□□□ -1.91
LHX6Q9UPM6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX6Q9UPM6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LHX6Q9UPM6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LHX6Q9UPM6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LHX6Q9UPM6 RNU6-824P-201ENST00000363724 104 ntBASIC3.13□□□□□ -1.91
LHX6Q9UPM6 SNORD101-201ENST00000384027 73 ntBASIC3.13□□□□□ -1.91
LHX6Q9UPM6 RNU1-138P-201ENST00000384093 164 ntBASIC3.13□□□□□ -1.91
LHX6Q9UPM6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.13□□□□□ -1.91
LHX6Q9UPM6 RNU7-195P-201ENST00000458793 62 ntBASIC3.13□□□□□ -1.91
LHX6Q9UPM6 RN7SL863P-201ENST00000462370 296 ntBASIC3.13□□□□□ -1.91
LHX6Q9UPM6 MIR4319-201ENST00000577285 85 ntBASIC3.13□□□□□ -1.91
LHX6Q9UPM6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LHX6Q9UPM6 RNU6-1123P-201ENST00000362347 106 ntBASIC3.12□□□□□ -1.91
LHX6Q9UPM6 RNU6-396P-201ENST00000365369 105 ntBASIC3.12□□□□□ -1.91
LHX6Q9UPM6 MIR653-201ENST00000385279 96 ntBASIC3.12□□□□□ -1.91
LHX6Q9UPM6 MIR4491-201ENST00000581087 68 ntBASIC3.12□□□□□ -1.91
LHX6Q9UPM6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
LHX6Q9UPM6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
LHX6Q9UPM6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.11□□□□□ -1.91
LHX6Q9UPM6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LHX6Q9UPM6 AP006437.1-201ENST00000641440 3685 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LHX6Q9UPM6 RNU1-91P-201ENST00000364746 163 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 RNU6-1187P-201ENST00000364771 110 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 AL606490.4-201ENST00000423117 127 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 AL691482.2-201ENST00000457453 84 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 TRAJ51-201ENST00000504127 63 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 RNU1-41P-201ENST00000516161 162 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 RNU1-48P-201ENST00000516400 162 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 SNORA25.16-201ENST00000516741 121 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 SNORA31.15-201ENST00000516771 132 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 RNU7-10P-201ENST00000607194 63 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LHX6Q9UPM6 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
LHX6Q9UPM6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LHX6Q9UPM6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LHX6Q9UPM6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LHX6Q9UPM6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.1□□□□□ -1.91
LHX6Q9UPM6 RNU6-1260P-201ENST00000362944 107 ntBASIC3.1□□□□□ -1.91
LHX6Q9UPM6 Y_RNA.536-201ENST00000384621 113 ntBASIC3.1□□□□□ -1.91
LHX6Q9UPM6 SNORD100-201ENST00000408573 76 ntBASIC3.1□□□□□ -1.91
LHX6Q9UPM6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC3.1□□□□□ -1.91
LHX6Q9UPM6 AC008885.1-201ENST00000514930 301 ntBASIC3.1□□□□□ -1.91
LHX6Q9UPM6 MAPK10-266ENST00000641066 6555 ntBASIC3.1□□□□□ -1.91
LHX6Q9UPM6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LHX6Q9UPM6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LHX6Q9UPM6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LHX6Q9UPM6 AC131280.1-202ENST00000624067 4211 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 AC108206.1-201ENST00000570186 4159 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 RNA5SP42-201ENST00000364278 115 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LHX6Q9UPM6 AC022018.1-201ENST00000430685 241 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 Y_RNA.809-201ENST00000516058 95 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 AP000942.3-201ENST00000603702 160 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 AL109933.3-201ENST00000619095 188 ntBASIC3.09□□□□□ -1.91
LHX6Q9UPM6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LHX6Q9UPM6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LHX6Q9UPM6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LHX6Q9UPM6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 284.9 ms