Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNU6-442P-201ENST00000383968 104 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 MIR9-2-201ENST00000384838 87 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 SNRPGP14-201ENST00000435400 219 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 RNU6-634P-201ENST00000459134 106 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 RNU6-70P-201ENST00000516438 60 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 RNA5SP33-201ENST00000516687 98 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 AC020891.4-201ENST00000605745 93 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 AC022709.1-201ENST00000615967 87 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 MIR338-201ENST00000636369 67 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 MIRLET7A1-201ENST00000362295 80 ntBASIC2.85□□□□□ -1.95
COL17A1Q9UMD9 RNU6-461P-201ENST00000364195 107 ntBASIC2.85□□□□□ -1.95
COL17A1Q9UMD9 SNORD30.1-201ENST00000391309 70 ntBASIC2.85□□□□□ -1.95
COL17A1Q9UMD9 RNU7-45P-201ENST00000459460 63 ntBASIC2.85□□□□□ -1.95
COL17A1Q9UMD9 AP002004.2-201ENST00000531656 154 ntBASIC2.85□□□□□ -1.95
COL17A1Q9UMD9 AL513043.2-201ENST00000573941 143 ntBASIC2.85□□□□□ -1.95
COL17A1Q9UMD9 SNORD14E-201ENST00000364009 85 ntBASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 Y_RNA.374-201ENST00000365606 101 ntBASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 SNORA8-201ENST00000384574 139 ntBASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 Y_RNA.567-201ENST00000384736 106 ntBASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 MIR34C-201ENST00000384831 77 ntBASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 RNU1-123P-201ENST00000458950 160 ntBASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 AC026271.5-201ENST00000577873 130 ntBASIC2.84□□□□□ -1.95
COL17A1Q9UMD9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 MIR340-201ENST00000362125 95 ntBASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 RNU6-471P-201ENST00000383944 106 ntBASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 RNU6-540P-201ENST00000384622 101 ntBASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 RNA5SP467-201ENST00000391274 118 ntBASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 RNA5SP338-201ENST00000410495 85 ntBASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 AC087499.4-201ENST00000448505 178 ntBASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 AL049830.1-201ENST00000468034 425 ntBASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 MIR4484-201ENST00000582855 83 ntBASIC2.84□□□□□ -1.96
COL17A1Q9UMD9 SNORD115-2-201ENST00000362842 82 ntBASIC2.83□□□□□ -1.96
COL17A1Q9UMD9 SNORD38.1-201ENST00000363863 68 ntBASIC2.83□□□□□ -1.96
COL17A1Q9UMD9 SNORD115-20-201ENST00000365099 82 ntBASIC2.83□□□□□ -1.96
COL17A1Q9UMD9 CST2P1-201ENST00000425770 87 ntBASIC2.83□□□□□ -1.96
COL17A1Q9UMD9 AC018868.1-201ENST00000491307 315 ntBASIC2.83□□□□□ -1.96
COL17A1Q9UMD9 MIR664A-201ENST00000626086 82 ntBASIC2.83□□□□□ -1.96
COL17A1Q9UMD9 U6.111-201ENST00000636093 83 ntBASIC2.83□□□□□ -1.96
COL17A1Q9UMD9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.82□□□□□ -1.96
COL17A1Q9UMD9 RNU6-686P-201ENST00000364839 107 ntBASIC2.82□□□□□ -1.96
COL17A1Q9UMD9 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
COL17A1Q9UMD9 SNORA32-201ENST00000384072 121 ntBASIC2.82□□□□□ -1.96
COL17A1Q9UMD9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.82□□□□□ -1.96
COL17A1Q9UMD9 MIR1236-201ENST00000408340 102 ntBASIC2.82□□□□□ -1.96
COL17A1Q9UMD9 AL512598.1-201ENST00000610158 273 ntBASIC2.82□□□□□ -1.96
COL17A1Q9UMD9 SNORD68-201ENST00000363214 84 ntBASIC2.81□□□□□ -1.96
COL17A1Q9UMD9 SNORD114-22-201ENST00000365423 72 ntBASIC2.81□□□□□ -1.96
COL17A1Q9UMD9 SNORA27-201ENST00000384323 126 ntBASIC2.81□□□□□ -1.96
COL17A1Q9UMD9 RNU6-1307P-201ENST00000391012 103 ntBASIC2.81□□□□□ -1.96
COL17A1Q9UMD9 RNU6-717P-201ENST00000459076 104 ntBASIC2.81□□□□□ -1.96
COL17A1Q9UMD9 RNU6-998P-201ENST00000515894 101 ntBASIC2.81□□□□□ -1.96
COL17A1Q9UMD9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.81□□□□□ -1.96
COL17A1Q9UMD9 Y_RNA.354-201ENST00000365448 111 ntBASIC2.8□□□□□ -1.96
COL17A1Q9UMD9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.8□□□□□ -1.96
COL17A1Q9UMD9 RNU6-443P-201ENST00000384780 107 ntBASIC2.8□□□□□ -1.96
COL17A1Q9UMD9 RNU6-380P-201ENST00000410207 107 ntBASIC2.8□□□□□ -1.96
COL17A1Q9UMD9 AC114811.1-201ENST00000507207 168 ntBASIC2.8□□□□□ -1.96
COL17A1Q9UMD9 RNU6-557P-201ENST00000516842 110 ntBASIC2.8□□□□□ -1.96
COL17A1Q9UMD9 RNU6-161P-201ENST00000363051 106 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 RNU6-42P-201ENST00000384165 107 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 Y_RNA.532-201ENST00000384590 113 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 MIR627-201ENST00000384979 97 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 MIR181B2-201ENST00000385004 89 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 RNU6-519P-201ENST00000410590 108 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 RPS29P28-201ENST00000446439 141 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 RNU7-128P-201ENST00000517247 62 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 AL645939.4-201ENST00000604495 135 ntBASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
COL17A1Q9UMD9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 SNORA63.2-201ENST00000362603 126 ntBASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 RNA5SP160-201ENST00000364866 120 ntBASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 MIR548G-201ENST00000408442 89 ntBASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 AC087499.7-201ENST00000441958 109 ntBASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 RNU7-2P-201ENST00000516096 62 ntBASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 Y_RNA.681-201ENST00000516445 113 ntBASIC2.78□□□□□ -1.96
COL17A1Q9UMD9 SNORA1B-201ENST00000362535 133 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 RNU6-614P-201ENST00000384369 107 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 SUMO1P4-201ENST00000429430 302 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 snoU13.11-201ENST00000459219 104 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 RNU7-34P-201ENST00000459394 64 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 RNU6-1108P-201ENST00000516308 104 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 SNORD45.4-201ENST00000516629 73 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 RNU6-90P-201ENST00000606352 106 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 U6.59-201ENST00000615686 107 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 MIRLET7G-201ENST00000362280 84 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 SNORD115-14-201ENST00000363090 81 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 RNU6-23P-201ENST00000363283 107 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 SNORD114-6-201ENST00000364393 72 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 RNU6-53P-201ENST00000365367 106 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 SPINT5P-201ENST00000448174 155 ntBASIC2.77□□□□□ -1.97
COL17A1Q9UMD9 RNU7-96P-201ENST00000459535 64 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms