Protein–RNA interactions for Protein: Q9P253

VPS18, Vacuolar protein sorting-associated protein 18 homolog, humanhuman

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18Q9P253 Y_RNA.784-201ENST00000613803 101 ntBASIC0.41□□□□□ -2.34
VPS18Q9P253 Y_RNA.787-201ENST00000616522 101 ntBASIC0.41□□□□□ -2.34
VPS18Q9P253 Y_RNA.780-201ENST00000617336 101 ntBASIC0.41□□□□□ -2.34
VPS18Q9P253 Y_RNA.801-201ENST00000619005 101 ntBASIC0.41□□□□□ -2.34
VPS18Q9P253 AC092634.7-201ENST00000621022 103 ntBASIC0.41□□□□□ -2.34
VPS18Q9P253 AC091932.4-201ENST00000623386 200 ntBASIC0.41□□□□□ -2.34
VPS18Q9P253 U6.104-201ENST00000637979 90 ntBASIC0.41□□□□□ -2.34
VPS18Q9P253 Y_RNA.262-201ENST00000364641 102 ntBASIC0.4□□□□□ -2.35
VPS18Q9P253 RNU4-45P-201ENST00000365469 141 ntBASIC0.4□□□□□ -2.35
VPS18Q9P253 RNU6-738P-201ENST00000384531 106 ntBASIC0.4□□□□□ -2.35
VPS18Q9P253 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS18Q9P253 AL358176.2-201ENST00000425769 204 ntBASIC0.4□□□□□ -2.35
VPS18Q9P253 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS18Q9P253 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS18Q9P253 RNY3P16-201ENST00000516338 101 ntBASIC0.4□□□□□ -2.35
VPS18Q9P253 AC090897.1-201ENST00000580909 226 ntBASIC0.4□□□□□ -2.35
VPS18Q9P253 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.4□□□□□ -2.35
VPS18Q9P253 Y_RNA.47-201ENST00000362697 108 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 RNU6-728P-201ENST00000365375 104 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 Y_RNA.542-201ENST00000384641 111 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
VPS18Q9P253 SNORD100-201ENST00000408573 76 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 RNU4-43P-201ENST00000410628 137 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 AC002350.1-201ENST00000490759 375 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 SNORA25.12-201ENST00000516202 82 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 SNORD92-201ENST00000585078 85 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 AL365205.2-201ENST00000594586 68 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 AL596211.1-201ENST00000569873 2277 ntBASIC0.39□□□□□ -2.35
VPS18Q9P253 Y_RNA.292-201ENST00000364904 97 ntBASIC0.38□□□□□ -2.35
VPS18Q9P253 MT-TF-201ENST00000387314 71 ntBASIC0.38□□□□□ -2.35
VPS18Q9P253 SNORD93-201ENST00000408813 74 ntBASIC0.38□□□□□ -2.35
VPS18Q9P253 SEPT7P4-201ENST00000437076 306 ntBASIC0.38□□□□□ -2.35
VPS18Q9P253 Y_RNA.149-201ENST00000363558 117 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 RNU6-103P-201ENST00000363686 107 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 RNU6-978P-201ENST00000364371 103 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 RNA5SP117-201ENST00000365294 118 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 Y_RNA.433-201ENST00000384089 102 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 Y_RNA.459-201ENST00000384251 102 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 Y_RNA.562-201ENST00000384695 113 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 RNU6-493P-201ENST00000391321 108 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 SNORA79-201ENST00000408376 140 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 Y_RNA.618-201ENST00000410949 107 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 SNORD127-201ENST00000458892 86 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 RNU7-80P-201ENST00000459562 61 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.37□□□□□ -2.35
VPS18Q9P253 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 Y_RNA.178-201ENST00000363832 102 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 Y_RNA.258-201ENST00000364613 105 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 RNA5SP517-201ENST00000364724 117 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 Y_RNA.308-201ENST00000365043 101 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 RNU6-1292P-201ENST00000383856 107 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 MIR1197-201ENST00000408818 88 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 RNA5SP261-201ENST00000410536 106 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 MIR4744-201ENST00000581563 82 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 AL360085.1-201ENST00000604713 532 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 RNU2-4P-201ENST00000606190 192 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 AL662814.1-201ENST00000617364 121 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 MIR6841-201ENST00000637129 72 ntBASIC0.36□□□□□ -2.35
VPS18Q9P253 SNORD27-201ENST00000363981 72 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 RNU6-694P-201ENST00000364071 147 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 Y_RNA.288-201ENST00000364854 92 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 MIR548H3-201ENST00000408771 118 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 RNA5SP237-201ENST00000410414 113 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.35□□□□□ -2.35
VPS18Q9P253 RPL39P25-201ENST00000449384 154 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 AL121914.1-201ENST00000450188 156 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 RNU6-448P-201ENST00000517052 107 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 MIR3678-201ENST00000578455 94 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 MIR3152-201ENST00000579801 74 ntBASIC0.35□□□□□ -2.35
VPS18Q9P253 Y_RNA.42-201ENST00000362660 108 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 RNY4P28-201ENST00000365281 93 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 Y_RNA.430-201ENST00000384081 110 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 Y_RNA.477-201ENST00000384352 108 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 RNU6-578P-201ENST00000390980 103 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 MTND2P23-201ENST00000422990 651 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 MTND1P19-201ENST00000511780 315 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 SCARNA15-202ENST00000516881 127 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 MIR4308-201ENST00000580634 81 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 MIR8066-201ENST00000617280 78 ntBASIC0.34□□□□□ -2.36
VPS18Q9P253 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
VPS18Q9P253 RNA5SP62-201ENST00000363457 110 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 RNU4-16P-201ENST00000364737 141 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 RNU6-923P-201ENST00000364753 107 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 Y_RNA.454-201ENST00000384224 113 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 Y_RNA.539-201ENST00000384635 107 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 RNU6-1011P-201ENST00000384668 107 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 MIR568-201ENST00000385036 95 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 RNA5SP63-201ENST00000391225 112 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 RNU4-83P-201ENST00000410863 133 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 Y_RNA.617-201ENST00000410920 90 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 MTCYBP9-201ENST00000431021 303 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 Y_RNA.668-201ENST00000516233 93 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 RNA5SP94-201ENST00000516917 108 ntBASIC0.33□□□□□ -2.36
VPS18Q9P253 MIR103A1-201ENST00000362165 78 ntBASIC0.32□□□□□ -2.36
VPS18Q9P253 SNORA22.1-201ENST00000362701 134 ntBASIC0.32□□□□□ -2.36
VPS18Q9P253 MIR518A1-201ENST00000385068 85 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms