Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 AC244098.3-201ENST00000424803 96 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 RNU6-977P-201ENST00000516411 103 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 RNU7-70P-201ENST00000516941 66 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 MIR3152-201ENST00000579801 74 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 MIR4804-201ENST00000581683 73 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 MIR4676-201ENST00000583078 72 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 AC104465.1-201ENST00000611365 139 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 AC021613.1-201ENST00000623880 111 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 Y_RNA.52-201ENST00000362760 96 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 RNU6-1082P-201ENST00000364574 107 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 RNU6-200P-201ENST00000364743 107 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 MIR520F-201ENST00000384824 87 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
HACD3Q9P035 RPS29P1-201ENST00000465274 159 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 AC107027.2-201ENST00000512197 115 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 RNU6-138P-201ENST00000515952 107 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 AP002392.1-201ENST00000537692 208 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 AC011195.1-201ENST00000578177 177 ntBASIC0.65□□□□□ -2.31
HACD3Q9P035 SNORA20-201ENST00000384662 132 ntBASIC0.64□□□□□ -2.31
HACD3Q9P035 RNU1-119P-201ENST00000391122 165 ntBASIC0.64□□□□□ -2.31
HACD3Q9P035 Y_RNA.793-201ENST00000411222 111 ntBASIC0.64□□□□□ -2.31
HACD3Q9P035 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.64□□□□□ -2.31
HACD3Q9P035 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
HACD3Q9P035 Y_RNA.676-201ENST00000516393 96 ntBASIC0.64□□□□□ -2.31
HACD3Q9P035 MIR6788-201ENST00000618842 66 ntBASIC0.64□□□□□ -2.31
HACD3Q9P035 SNORA22.1-201ENST00000362701 134 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 Y_RNA.337-201ENST00000365312 102 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 MIR520H-201ENST00000385126 88 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 MT-TF-201ENST00000387314 71 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 RNU5E-9P-201ENST00000411164 104 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 RNU7-185P-201ENST00000459215 60 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 RNA5SP236-201ENST00000516169 116 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.63□□□□□ -2.31
HACD3Q9P035 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
HACD3Q9P035 RNU4-84P-201ENST00000364200 139 ntBASIC0.62□□□□□ -2.31
HACD3Q9P035 Y_RNA.240-201ENST00000364469 95 ntBASIC0.62□□□□□ -2.31
HACD3Q9P035 RNU4-16P-201ENST00000364737 141 ntBASIC0.62□□□□□ -2.31
HACD3Q9P035 RNU7-120P-201ENST00000459334 63 ntBASIC0.62□□□□□ -2.31
HACD3Q9P035 AL662814.1-201ENST00000617364 121 ntBASIC0.62□□□□□ -2.31
HACD3Q9P035 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
HACD3Q9P035 RNU6-349P-201ENST00000362402 107 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 RNY1P6-201ENST00000384193 109 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 MIR573-201ENST00000384964 99 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 MIR125B2-201ENST00000385128 89 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 RNU6-239P-201ENST00000390990 99 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 MIR938-201ENST00000401216 83 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 RNU7-121P-201ENST00000516604 62 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 RNU6-861P-201ENST00000516745 106 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 RNU6-1258P-201ENST00000516911 111 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 MIR151B-201ENST00000584249 96 ntBASIC0.61□□□□□ -2.31
HACD3Q9P035 RNU6-682P-201ENST00000363843 106 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 Y_RNA.257-201ENST00000364596 102 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 RNU6-818P-201ENST00000364837 108 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 Y_RNA.357-201ENST00000365487 109 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HACD3Q9P035 Y_RNA.497-201ENST00000384447 98 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 SNORA75.5-201ENST00000391291 81 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 MIR1257-201ENST00000408490 117 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 MIR548J-201ENST00000408833 112 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.6□□□□□ -2.31
HACD3Q9P035 MIR3646-201ENST00000578301 84 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.6□□□□□ -2.31
HACD3Q9P035 MIR3658-201ENST00000636291 56 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 MIR6844-201ENST00000637122 62 ntBASIC0.6□□□□□ -2.31
HACD3Q9P035 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.59□□□□□ -2.31
HACD3Q9P035 RNU6-588P-201ENST00000410281 105 ntBASIC0.59□□□□□ -2.31
HACD3Q9P035 RNA5SP237-201ENST00000410414 113 ntBASIC0.59□□□□□ -2.31
HACD3Q9P035 Y_RNA.700-201ENST00000516806 100 ntBASIC0.59□□□□□ -2.31
HACD3Q9P035 RNU7-156P-201ENST00000517214 74 ntBASIC0.59□□□□□ -2.31
HACD3Q9P035 Y_RNA.757-201ENST00000578934 114 ntBASIC0.59□□□□□ -2.31
HACD3Q9P035 AC008608.1-201ENST00000603910 127 ntBASIC0.59□□□□□ -2.31
HACD3Q9P035 Y_RNA.29-201ENST00000362570 113 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 RNY1P11-201ENST00000363759 113 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 Y_RNA.785-201ENST00000384290 109 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 RNA5SP144-201ENST00000410846 116 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 SNORA81.3-201ENST00000517283 198 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 RNU2-60P-201ENST00000517290 128 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 AC141846.1-201ENST00000568348 142 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 SNORA4-201ENST00000584302 138 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 SNORD92-201ENST00000585078 85 ntBASIC0.58□□□□□ -2.32
HACD3Q9P035 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.58□□□□□ -2.32
HACD3Q9P035 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HACD3Q9P035 Y_RNA.171-201ENST00000363760 102 ntBASIC0.57□□□□□ -2.32
HACD3Q9P035 Y_RNA.224-201ENST00000364308 111 ntBASIC0.57□□□□□ -2.32
HACD3Q9P035 Y_RNA.441-201ENST00000384123 112 ntBASIC0.57□□□□□ -2.32
HACD3Q9P035 RNU6-364P-201ENST00000384387 107 ntBASIC0.57□□□□□ -2.32
HACD3Q9P035 SNORA18-201ENST00000384416 132 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms