Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.42□□□□□ -2.18
NCKIPSDQ9NZQ3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.42□□□□□ -2.18
NCKIPSDQ9NZQ3 MIR302B-201ENST00000362188 73 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 Y_RNA.298-201ENST00000364960 107 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 SNORA22-201ENST00000383907 134 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 RNU6-947P-201ENST00000516264 106 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 SNORD111.1-201ENST00000516421 86 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 MIR4679-2-201ENST00000578358 77 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 MIR3192-201ENST00000584920 77 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 HSPE1P19-201ENST00000603327 295 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 AL357312.1-201ENST00000603879 298 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 MIR4791-201ENST00000607666 84 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 AL096861.1-201ENST00000610899 123 ntBASIC1.41□□□□□ -2.18
NCKIPSDQ9NZQ3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.18
NCKIPSDQ9NZQ3 RNY4P6-201ENST00000363667 96 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR548A1-201ENST00000385041 97 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-913P-201ENST00000390913 95 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-893P-201ENST00000458841 100 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU7-43P-201ENST00000516554 64 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 RNY4P20-201ENST00000516678 93 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU7-53P-201ENST00000516705 60 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 AC007012.1-201ENST00000567192 175 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR4305-201ENST00000583252 102 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 AC008133.2-201ENST00000624540 351 ntBASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR342-201ENST00000362212 99 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR520C-201ENST00000385005 87 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 RNA5SP261-201ENST00000410536 106 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 RPL39P39-201ENST00000455840 151 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 RPS29P29-201ENST00000456396 171 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU2-11P-201ENST00000459191 187 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU7-164P-201ENST00000459221 62 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR3152-201ENST00000579801 74 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 AC243994.1-201ENST00000618627 109 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR8065-201ENST00000620577 100 ntBASIC1.39□□□□□ -2.19
NCKIPSDQ9NZQ3 SNORA63.4-201ENST00000362763 126 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-747P-201ENST00000390928 104 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-241P-201ENST00000391148 104 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-177P-201ENST00000411257 104 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU7-45P-201ENST00000459460 63 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
NCKIPSDQ9NZQ3 AL391516.1-201ENST00000554380 2449 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU4-16P-201ENST00000364737 141 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR518E-201ENST00000385252 88 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 RNA5SP144-201ENST00000410846 116 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 AL022718.1-201ENST00000412004 84 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU7-73P-201ENST00000458743 63 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU7-67P-201ENST00000459003 62 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU7-123P-201ENST00000515911 60 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-958P-201ENST00000516995 106 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR6504-201ENST00000613520 61 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 AC021613.1-201ENST00000623880 111 ntBASIC1.37□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.36□□□□□ -2.19
NCKIPSDQ9NZQ3 SNORA51.10-201ENST00000384418 136 ntBASIC1.36□□□□□ -2.19
NCKIPSDQ9NZQ3 SNORA26.6-201ENST00000391256 115 ntBASIC1.36□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR3163-201ENST00000581592 73 ntBASIC1.36□□□□□ -2.19
NCKIPSDQ9NZQ3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.36□□□□□ -2.19
NCKIPSDQ9NZQ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
NCKIPSDQ9NZQ3 AL589743.1-201ENST00000551932 2712 ntBASIC1.36□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 SNORD12C-201ENST00000386307 89 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR1276-201ENST00000408707 83 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 HMGN1P33-201ENST00000432945 451 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU1-123P-201ENST00000458950 160 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 snoU13.16-201ENST00000459350 104 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU2-35P-201ENST00000516446 142 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR548AO-201ENST00000579992 96 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 AL020996.3-201ENST00000606617 222 ntBASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NCKIPSDQ9NZQ3 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-1107P-201ENST00000364817 104 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR1302-7-201ENST00000408841 72 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 AC090844.1-201ENST00000422019 156 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 RPL39P34-201ENST00000477141 156 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 AC004812.1-201ENST00000540773 146 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 RNU6-94P-201ENST00000607728 107 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 MIR4251-201ENST00000635819 61 ntBASIC1.34□□□□□ -2.19
NCKIPSDQ9NZQ3 SNORD115-2-201ENST00000362842 82 ntBASIC1.33□□□□□ -2.2
NCKIPSDQ9NZQ3 SNORD115-20-201ENST00000365099 82 ntBASIC1.33□□□□□ -2.2
NCKIPSDQ9NZQ3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.33□□□□□ -2.2
NCKIPSDQ9NZQ3 MIR548D2-201ENST00000384955 97 ntBASIC1.33□□□□□ -2.2
NCKIPSDQ9NZQ3 POLR2J4-204ENST00000418424 324 ntBASIC1.33□□□□□ -2.2
NCKIPSDQ9NZQ3 AL031737.1-201ENST00000450125 223 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms