Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 MIR1827-201ENST00000408549 66 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 SNORD83.1-201ENST00000411362 77 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 RNU7-62P-201ENST00000458856 62 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 RNU7-120P-201ENST00000459334 63 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 RNU6-861P-201ENST00000516745 106 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 MIR6779-201ENST00000617283 64 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 SNORD38B-202ENST00000625943 69 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 MIR302B-201ENST00000362188 73 ntBASIC0.74□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.52-201ENST00000362760 96 ntBASIC0.74□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.240-201ENST00000364469 95 ntBASIC0.74□□□□□ -2.29
NLGN3Q9NZ94 SNORD12C-201ENST00000386307 89 ntBASIC0.74□□□□□ -2.29
NLGN3Q9NZ94 RNU7-80P-201ENST00000459562 61 ntBASIC0.74□□□□□ -2.29
NLGN3Q9NZ94 AC107027.2-201ENST00000512197 115 ntBASIC0.74□□□□□ -2.29
NLGN3Q9NZ94 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.74□□□□□ -2.29
NLGN3Q9NZ94 RN7SL793P-201ENST00000583259 296 ntBASIC0.74□□□□□ -2.29
NLGN3Q9NZ94 RNY1P11-201ENST00000363759 113 ntBASIC0.73□□□□□ -2.29
NLGN3Q9NZ94 RNU4-84P-201ENST00000364200 139 ntBASIC0.73□□□□□ -2.29
NLGN3Q9NZ94 MIR588-201ENST00000384900 83 ntBASIC0.73□□□□□ -2.29
NLGN3Q9NZ94 MIR216A-201ENST00000385063 110 ntBASIC0.73□□□□□ -2.29
NLGN3Q9NZ94 snoU13.2-201ENST00000459201 104 ntBASIC0.73□□□□□ -2.29
NLGN3Q9NZ94 RNA5SP236-201ENST00000516169 116 ntBASIC0.73□□□□□ -2.29
NLGN3Q9NZ94 MIR3658-201ENST00000636291 56 ntBASIC0.73□□□□□ -2.29
NLGN3Q9NZ94 MIR6841-201ENST00000637129 72 ntBASIC0.73□□□□□ -2.29
NLGN3Q9NZ94 AC010332.2-201ENST00000613083 1904 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.29-201ENST00000362570 113 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.454-201ENST00000384224 113 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.785-201ENST00000384290 109 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 MIR563-201ENST00000385080 79 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 RNU6-1319P-201ENST00000390855 104 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 RNU6-747P-201ENST00000390928 104 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 RNU6-241P-201ENST00000391148 104 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 RNU6-177P-201ENST00000411257 104 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 U7.7-201ENST00000459276 60 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 AC074198.2-201ENST00000508153 258 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 SNORA81.3-201ENST00000517283 198 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 MIR6513-201ENST00000621188 64 ntBASIC0.72□□□□□ -2.29
NLGN3Q9NZ94 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 RNU4-16P-201ENST00000364737 141 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 RNU6-239P-201ENST00000390990 99 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 RNU6-1165P-201ENST00000410119 107 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 RNU7-121P-201ENST00000516604 62 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 Y_RNA.700-201ENST00000516806 100 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 AC020891.4-201ENST00000605745 93 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 AC004792.1-201ENST00000614523 137 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 AC021613.1-201ENST00000623880 111 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 AC023934.1-201ENST00000574529 2389 ntBASIC0.71□□□□□ -2.3
NLGN3Q9NZ94 MIR30D-201ENST00000362283 70 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 RNU6-934P-201ENST00000365154 107 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 Y_RNA.337-201ENST00000365312 102 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 Y_RNA.430-201ENST00000384081 110 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 Y_RNA.441-201ENST00000384123 112 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 SNORD99-201ENST00000408612 74 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 RPS26P5-201ENST00000418544 335 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 AC067940.1-201ENST00000458411 300 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 RNU2-60P-201ENST00000517290 128 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
NLGN3Q9NZ94 Y_RNA.497-201ENST00000384447 98 ntBASIC0.69□□□□□ -2.3
NLGN3Q9NZ94 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
NLGN3Q9NZ94 RNU6-588P-201ENST00000410281 105 ntBASIC0.69□□□□□ -2.3
NLGN3Q9NZ94 AC113410.1-201ENST00000505029 247 ntBASIC0.69□□□□□ -2.3
NLGN3Q9NZ94 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.69□□□□□ -2.3
NLGN3Q9NZ94 MIR1-1-201ENST00000362147 71 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 RNU6-349P-201ENST00000362402 107 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 SNORA22.1-201ENST00000362701 134 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 RNU6-818P-201ENST00000364837 108 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 RNY1P4-201ENST00000384595 115 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 SNORA75.5-201ENST00000391291 81 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 RNA5SP261-201ENST00000410536 106 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 RNU6-1258P-201ENST00000516911 111 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 RNU7-70P-201ENST00000516941 66 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 MIR6844-201ENST00000637122 62 ntBASIC0.68□□□□□ -2.3
NLGN3Q9NZ94 Y_RNA.357-201ENST00000365487 109 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 RNU6-1135P-201ENST00000411083 103 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 MIR18B-201ENST00000454574 71 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 Y_RNA.662-201ENST00000516028 97 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 AC004812.1-201ENST00000540773 146 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 MIR4804-201ENST00000581683 73 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 MIR4676-201ENST00000583078 72 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 AC090425.1-201ENST00000610007 140 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 AC104465.1-201ENST00000611365 139 ntBASIC0.67□□□□□ -2.3
NLGN3Q9NZ94 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms