Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 SNORD115-18-201ENST00000363293 82 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 Y_RNA.163-201ENST00000363702 113 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 SNORD115-17-201ENST00000364612 82 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 U8.6-201ENST00000364939 135 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 RNA5SP33-201ENST00000516687 98 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 AC068339.1-201ENST00000526965 141 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 MIR548AE2-201ENST00000583456 67 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 MIR3192-201ENST00000584920 77 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 AL096861.1-201ENST00000610899 123 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 GHRLOS.1-201ENST00000610995 70 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 MIR8065-201ENST00000620577 100 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 MIR8063-201ENST00000621930 81 ntBASIC1.9□□□□□ -2.11
CLDND1Q9NY35 RNA5SP48-201ENST00000363969 126 ntBASIC1.89□□□□□ -2.11
CLDND1Q9NY35 MIR30A-201ENST00000385092 71 ntBASIC1.89□□□□□ -2.11
CLDND1Q9NY35 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
CLDND1Q9NY35 RNU6-602P-201ENST00000411155 105 ntBASIC1.89□□□□□ -2.11
CLDND1Q9NY35 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
CLDND1Q9NY35 MIR5009-201ENST00000578736 100 ntBASIC1.89□□□□□ -2.11
CLDND1Q9NY35 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
CLDND1Q9NY35 AL162726.3-218ENST00000636401 95 ntBASIC1.89□□□□□ -2.11
CLDND1Q9NY35 Y_RNA.309-201ENST00000365046 111 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 AC090844.1-201ENST00000422019 156 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 HSPE1P24-201ENST00000450782 238 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 AC009474.2-201ENST00000451383 136 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 MIR1270-201ENST00000459320 83 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 CYP3A52P-201ENST00000563326 91 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 SNORA4-201ENST00000584302 138 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
CLDND1Q9NY35 SNORD1A-201ENST00000364968 72 ntBASIC1.87□□□□□ -2.11
CLDND1Q9NY35 RNA5SP138-201ENST00000365098 114 ntBASIC1.87□□□□□ -2.11
CLDND1Q9NY35 Y_RNA.327-201ENST00000365201 102 ntBASIC1.87□□□□□ -2.11
CLDND1Q9NY35 Y_RNA.354-201ENST00000365448 111 ntBASIC1.87□□□□□ -2.11
CLDND1Q9NY35 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLDND1Q9NY35 MIR1302-5-201ENST00000408164 150 ntBASIC1.87□□□□□ -2.11
CLDND1Q9NY35 Y_RNA.773-201ENST00000607168 90 ntBASIC1.87□□□□□ -2.11
CLDND1Q9NY35 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.87□□□□□ -2.11
CLDND1Q9NY35 AC131280.1-202ENST00000624067 4211 ntBASIC1.87□□□□□ -2.11
CLDND1Q9NY35 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLDND1Q9NY35 MIR1255B1-201ENST00000636325 63 ntBASIC1.86□□□□□ -2.11
CLDND1Q9NY35 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLDND1Q9NY35 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLDND1Q9NY35 RNU6-766P-201ENST00000362478 107 ntBASIC1.85□□□□□ -2.11
CLDND1Q9NY35 Y_RNA.328-201ENST00000365208 113 ntBASIC1.85□□□□□ -2.11
CLDND1Q9NY35 SNORA32-201ENST00000384072 121 ntBASIC1.85□□□□□ -2.11
CLDND1Q9NY35 RNU6-816P-201ENST00000390914 107 ntBASIC1.85□□□□□ -2.11
CLDND1Q9NY35 RNU6-1268P-201ENST00000391214 107 ntBASIC1.85□□□□□ -2.11
CLDND1Q9NY35 RNU6-1239P-201ENST00000391310 107 ntBASIC1.85□□□□□ -2.11
CLDND1Q9NY35 MIR1912-201ENST00000410389 80 ntBASIC1.85□□□□□ -2.11
CLDND1Q9NY35 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
CLDND1Q9NY35 RNU6-32P-201ENST00000383948 107 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 RNU6-756P-201ENST00000383997 107 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 RNU6-13P-201ENST00000384248 107 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 RNU6-342P-201ENST00000384521 104 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 RNU6-12P-201ENST00000384604 107 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 RNU6-41P-201ENST00000384741 107 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 SNORD77B-201ENST00000391112 67 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 MIR1276-201ENST00000408707 83 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 RNA5SP89-201ENST00000410300 108 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 AC245047.7-201ENST00000440265 293 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 RPL39P25-201ENST00000449384 154 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 snoU13.25-201ENST00000458945 104 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 RNU6-168P-201ENST00000516189 101 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 MIR6504-201ENST00000613520 61 ntBASIC1.84□□□□□ -2.11
CLDND1Q9NY35 SNORA51.5-201ENST00000384126 131 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 Y_RNA.495-201ENST00000384435 112 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 SNORD38B-201ENST00000384690 67 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 MIR1302-7-201ENST00000408841 72 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 AC079804.2-201ENST00000490376 200 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 AC079140.2-201ENST00000506193 142 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 MIR4255-201ENST00000579351 72 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 SNORD38B-202ENST00000625943 69 ntBASIC1.83□□□□□ -2.12
CLDND1Q9NY35 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLDND1Q9NY35 AL359851.1-201ENST00000569460 4997 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 SNORD33-201ENST00000362761 85 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 RNU6-363P-201ENST00000362895 105 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 RNU6-616P-201ENST00000384353 107 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 SNORA18-201ENST00000384416 132 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 Y_RNA.507-201ENST00000384500 99 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLDND1Q9NY35 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 RNU6-947P-201ENST00000516264 106 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 RNU7-35P-201ENST00000517174 62 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
CLDND1Q9NY35 PRELID3BP2-201ENST00000605362 201 ntBASIC1.82□□□□□ -2.12
CLDND1Q9NY35 RNU4-67P-201ENST00000364569 141 ntBASIC1.81□□□□□ -2.12
CLDND1Q9NY35 RNU6-42P-201ENST00000384165 107 ntBASIC1.81□□□□□ -2.12
CLDND1Q9NY35 AC027119.1-201ENST00000440877 241 ntBASIC1.81□□□□□ -2.12
CLDND1Q9NY35 RPL39P39-201ENST00000455840 151 ntBASIC1.81□□□□□ -2.12
CLDND1Q9NY35 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.81□□□□□ -2.12
CLDND1Q9NY35 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.81□□□□□ -2.12
CLDND1Q9NY35 MIR514B-201ENST00000516774 80 ntBASIC1.81□□□□□ -2.12
CLDND1Q9NY35 SNORD53B-201ENST00000577887 78 ntBASIC1.81□□□□□ -2.12
CLDND1Q9NY35 AL078603.1-201ENST00000603824 313 ntBASIC1.81□□□□□ -2.12
CLDND1Q9NY35 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms