Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RNY1P7-201ENST00000384743 110 ntBASIC2.26□□□□□ -2.05
TMEM39AQ9NV64 snoU13.31-201ENST00000607291 104 ntBASIC2.26□□□□□ -2.05
TMEM39AQ9NV64 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TMEM39AQ9NV64 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 SNORD73B-201ENST00000364394 72 ntBASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 AC244636.1-201ENST00000421152 228 ntBASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 AL445685.2-201ENST00000422551 342 ntBASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 MIR3935-201ENST00000583472 104 ntBASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 MALAT1.1-201ENST00000618249 95 ntBASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 AL512310.12-203ENST00000640543 90 ntBASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
TMEM39AQ9NV64 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.24□□□□□ -2.05
TMEM39AQ9NV64 MIR378A-201ENST00000362177 66 ntBASIC2.24□□□□□ -2.05
TMEM39AQ9NV64 Y_RNA.466-201ENST00000384294 113 ntBASIC2.24□□□□□ -2.05
TMEM39AQ9NV64 SNORA17.3-201ENST00000391159 129 ntBASIC2.24□□□□□ -2.05
TMEM39AQ9NV64 AC090844.1-201ENST00000422019 156 ntBASIC2.24□□□□□ -2.05
TMEM39AQ9NV64 RNU6-1018P-201ENST00000516577 106 ntBASIC2.24□□□□□ -2.05
TMEM39AQ9NV64 RNU6-922P-201ENST00000516753 99 ntBASIC2.24□□□□□ -2.05
TMEM39AQ9NV64 SNORD115-35-201ENST00000365122 82 ntBASIC2.23□□□□□ -2.05
TMEM39AQ9NV64 Y_RNA.342-201ENST00000365352 113 ntBASIC2.23□□□□□ -2.05
TMEM39AQ9NV64 RNU6-795P-201ENST00000516323 103 ntBASIC2.23□□□□□ -2.05
TMEM39AQ9NV64 SNORD111.1-201ENST00000516421 86 ntBASIC2.23□□□□□ -2.05
TMEM39AQ9NV64 RNU7-35P-201ENST00000517174 62 ntBASIC2.23□□□□□ -2.05
TMEM39AQ9NV64 AC022254.1-201ENST00000567857 235 ntBASIC2.23□□□□□ -2.05
TMEM39AQ9NV64 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
TMEM39AQ9NV64 AC012531.4-201ENST00000616509 177 ntBASIC2.23□□□□□ -2.05
TMEM39AQ9NV64 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 MIR337-201ENST00000362281 93 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 RNU6-1201P-201ENST00000384227 107 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 Y_RNA.558-201ENST00000384685 113 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 SNORD38B-201ENST00000384690 67 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 SNORD41-201ENST00000386967 70 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 MIR1302-4-201ENST00000408701 150 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 AC009474.2-201ENST00000451383 136 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 RNU7-2P-201ENST00000516096 62 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 AL442128.1-201ENST00000615151 90 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 SNORD38B-202ENST00000625943 69 ntBASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
TMEM39AQ9NV64 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.05
TMEM39AQ9NV64 AL596028.1-201ENST00000326971 197 ntBASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 RNU6-170P-201ENST00000362832 104 ntBASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 Y_RNA.377-201ENST00000365644 108 ntBASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 RNU6-1086P-201ENST00000410930 100 ntBASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 RPL31P63-201ENST00000422565 375 ntBASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 RNU6-844P-201ENST00000517175 102 ntBASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 SNORA77B-201ENST00000578179 125 ntBASIC2.21□□□□□ -2.06
TMEM39AQ9NV64 RNU6-1313P-201ENST00000362622 102 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 SNORD45B-201ENST00000364617 72 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 RNU6-1237P-201ENST00000384777 107 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 AC004941.2-201ENST00000427009 228 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 RNU7-61P-201ENST00000515897 61 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 Y_RNA.659-201ENST00000515994 113 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 RNU7-79P-201ENST00000516082 62 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 AC015688.6-201ENST00000577737 104 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 MIR548Z-201ENST00000584743 97 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 MIR8074-201ENST00000615081 81 ntBASIC2.2□□□□□ -2.06
TMEM39AQ9NV64 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TMEM39AQ9NV64 RNA5SP48-201ENST00000363969 126 ntBASIC2.19□□□□□ -2.06
TMEM39AQ9NV64 MIR206-201ENST00000384872 86 ntBASIC2.19□□□□□ -2.06
TMEM39AQ9NV64 MIR17-201ENST00000385012 84 ntBASIC2.19□□□□□ -2.06
TMEM39AQ9NV64 RNU6-644P-201ENST00000391155 98 ntBASIC2.19□□□□□ -2.06
TMEM39AQ9NV64 MIR4713-201ENST00000582691 75 ntBASIC2.19□□□□□ -2.06
TMEM39AQ9NV64 AC091304.10-201ENST00000641554 121 ntBASIC2.19□□□□□ -2.06
TMEM39AQ9NV64 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TMEM39AQ9NV64 Y_RNA.118-201ENST00000363300 101 ntBASIC2.18□□□□□ -2.06
TMEM39AQ9NV64 RNA5SP190-201ENST00000365222 118 ntBASIC2.18□□□□□ -2.06
TMEM39AQ9NV64 AC096949.1-201ENST00000412047 152 ntBASIC2.18□□□□□ -2.06
TMEM39AQ9NV64 BTF3P4-201ENST00000418852 495 ntBASIC2.18□□□□□ -2.06
TMEM39AQ9NV64 SNORD67.1-201ENST00000516618 108 ntBASIC2.18□□□□□ -2.06
TMEM39AQ9NV64 MIR3192-201ENST00000584920 77 ntBASIC2.18□□□□□ -2.06
TMEM39AQ9NV64 AL357312.1-201ENST00000603879 298 ntBASIC2.18□□□□□ -2.06
TMEM39AQ9NV64 AC096720.1-201ENST00000604441 183 ntBASIC2.18□□□□□ -2.06
TMEM39AQ9NV64 RNU6-321P-201ENST00000410912 106 ntBASIC2.17□□□□□ -2.06
TMEM39AQ9NV64 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
TMEM39AQ9NV64 SNORA25.15-201ENST00000516487 89 ntBASIC2.17□□□□□ -2.06
TMEM39AQ9NV64 RNU6-762P-201ENST00000517107 102 ntBASIC2.17□□□□□ -2.06
TMEM39AQ9NV64 MIR4299-201ENST00000577899 72 ntBASIC2.17□□□□□ -2.06
TMEM39AQ9NV64 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.17□□□□□ -2.06
TMEM39AQ9NV64 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TMEM39AQ9NV64 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TMEM39AQ9NV64 Y_RNA.95-201ENST00000363079 95 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 RNU6-60P-201ENST00000364792 103 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 Y_RNA.508-201ENST00000384502 114 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 RNU6-1307P-201ENST00000391012 103 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 SNORD13-201ENST00000459299 104 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 UBL5P1-201ENST00000507979 193 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 RNA5SP445-201ENST00000515889 115 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 MIR4777-201ENST00000583710 86 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 AL096861.1-201ENST00000610899 123 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 GHRLOS.1-201ENST00000610995 70 ntBASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TMEM39AQ9NV64 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms