Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR936-201ENST00000401264 98 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 SEPT7P4-201ENST00000437076 306 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 RNU7-45P-201ENST00000459460 63 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 MIR376A2-201ENST00000636782 80 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 RNU6-1011P-201ENST00000384668 107 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 MIR216A-201ENST00000385063 110 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 MIR1302-3-201ENST00000408128 138 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 RNU4-83P-201ENST00000410863 133 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 MTND1P19-201ENST00000511780 315 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 Y_RNA.797-201ENST00000515977 94 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 SNORA25.12-201ENST00000516202 82 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.42□□□□□ -2.34
BLOC1S4Q9NUP1 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 Y_RNA.459-201ENST00000384251 102 ntBASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 MIR624-201ENST00000385217 97 ntBASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 SNORD127-201ENST00000458892 86 ntBASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 RNU6-469P-201ENST00000516253 101 ntBASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 AC011921.3-201ENST00000605540 361 ntBASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 AC021613.1-201ENST00000623880 111 ntBASIC0.41□□□□□ -2.34
BLOC1S4Q9NUP1 SNORA22.1-201ENST00000362701 134 ntBASIC0.4□□□□□ -2.35
BLOC1S4Q9NUP1 Y_RNA.76-201ENST00000362931 109 ntBASIC0.4□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-738P-201ENST00000384531 106 ntBASIC0.4□□□□□ -2.35
BLOC1S4Q9NUP1 MIR598-201ENST00000384868 97 ntBASIC0.4□□□□□ -2.35
BLOC1S4Q9NUP1 RNA5SP94-201ENST00000516917 108 ntBASIC0.4□□□□□ -2.35
BLOC1S4Q9NUP1 MIR4643-201ENST00000577473 78 ntBASIC0.4□□□□□ -2.35
BLOC1S4Q9NUP1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-978P-201ENST00000364371 103 ntBASIC0.39□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.39□□□□□ -2.35
BLOC1S4Q9NUP1 MIR518A1-201ENST00000385068 85 ntBASIC0.39□□□□□ -2.35
BLOC1S4Q9NUP1 RNU2-38P-201ENST00000410856 79 ntBASIC0.39□□□□□ -2.35
BLOC1S4Q9NUP1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.39□□□□□ -2.35
BLOC1S4Q9NUP1 MIR6841-201ENST00000637129 72 ntBASIC0.39□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 SNORA25.7-201ENST00000364375 127 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 Y_RNA.308-201ENST00000365043 101 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 RNY4P28-201ENST00000365281 93 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 Y_RNA.478-201ENST00000384358 107 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 Y_RNA.562-201ENST00000384695 113 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 MIR489-201ENST00000384923 84 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 RNU5E-9P-201ENST00000411164 104 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
BLOC1S4Q9NUP1 AL589743.1-201ENST00000551932 2712 ntBASIC0.37□□□□□ -2.35
BLOC1S4Q9NUP1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.37□□□□□ -2.35
BLOC1S4Q9NUP1 RNA5SP517-201ENST00000364724 117 ntBASIC0.37□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-135P-201ENST00000516769 101 ntBASIC0.37□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-765P-201ENST00000516916 99 ntBASIC0.37□□□□□ -2.35
BLOC1S4Q9NUP1 AC141846.1-201ENST00000568348 142 ntBASIC0.37□□□□□ -2.35
BLOC1S4Q9NUP1 MIR3678-201ENST00000578455 94 ntBASIC0.37□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-643P-201ENST00000384018 107 ntBASIC0.36□□□□□ -2.35
BLOC1S4Q9NUP1 AL358176.2-201ENST00000425769 204 ntBASIC0.36□□□□□ -2.35
BLOC1S4Q9NUP1 AC022523.2-201ENST00000561045 150 ntBASIC0.36□□□□□ -2.35
BLOC1S4Q9NUP1 RNU2-4P-201ENST00000606190 192 ntBASIC0.36□□□□□ -2.35
BLOC1S4Q9NUP1 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
BLOC1S4Q9NUP1 MIR8066-201ENST00000617280 78 ntBASIC0.36□□□□□ -2.35
BLOC1S4Q9NUP1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.36□□□□□ -2.35
BLOC1S4Q9NUP1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.35□□□□□ -2.35
BLOC1S4Q9NUP1 RNU4-70P-201ENST00000384579 139 ntBASIC0.35□□□□□ -2.35
BLOC1S4Q9NUP1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.35□□□□□ -2.35
BLOC1S4Q9NUP1 RNU6-403P-201ENST00000363163 104 ntBASIC0.34□□□□□ -2.36
BLOC1S4Q9NUP1 RNU6-949P-201ENST00000384040 107 ntBASIC0.34□□□□□ -2.36
BLOC1S4Q9NUP1 RNU6-493P-201ENST00000391321 108 ntBASIC0.34□□□□□ -2.36
BLOC1S4Q9NUP1 RNU6-1149P-201ENST00000516810 97 ntBASIC0.34□□□□□ -2.36
BLOC1S4Q9NUP1 MIR6082-201ENST00000613604 109 ntBASIC0.34□□□□□ -2.36
BLOC1S4Q9NUP1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.34□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.20-201ENST00000362479 113 ntBASIC0.33□□□□□ -2.36
BLOC1S4Q9NUP1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.33□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.571-201ENST00000384753 98 ntBASIC0.33□□□□□ -2.36
BLOC1S4Q9NUP1 SNORD58.1-201ENST00000391313 66 ntBASIC0.33□□□□□ -2.36
BLOC1S4Q9NUP1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.33□□□□□ -2.36
BLOC1S4Q9NUP1 SCARNA15-202ENST00000516881 127 ntBASIC0.33□□□□□ -2.36
BLOC1S4Q9NUP1 SNORD118-201ENST00000363593 134 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.182-201ENST00000363880 111 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 SNORD27-201ENST00000363981 72 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 RNU6-275P-201ENST00000364910 107 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 SNORA8.2-201ENST00000384372 139 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 U8.15-201ENST00000390947 134 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 AL512326.2-201ENST00000426359 151 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 MTCYBP9-201ENST00000431021 303 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 AL360085.1-201ENST00000604713 532 ntBASIC0.32□□□□□ -2.36
BLOC1S4Q9NUP1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 RNY1P6-201ENST00000384193 109 ntBASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 SNORA18-201ENST00000384416 132 ntBASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.626-201ENST00000411288 95 ntBASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 RNU4-71P-201ENST00000516258 113 ntBASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 RNY3P16-201ENST00000516338 101 ntBASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 AC133485.4-201ENST00000561835 220 ntBASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 237.5 ms