Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC087499.7-201ENST00000441958 109 ntBASIC0.97□□□□□ -2.25
ECHDC1Q9NTX5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.97□□□□□ -2.25
ECHDC1Q9NTX5 Y_RNA.651-201ENST00000459380 103 ntBASIC0.97□□□□□ -2.25
ECHDC1Q9NTX5 RNU7-53P-201ENST00000516705 60 ntBASIC0.97□□□□□ -2.25
ECHDC1Q9NTX5 AC112693.2-201ENST00000556538 232 ntBASIC0.97□□□□□ -2.25
ECHDC1Q9NTX5 MIR3646-201ENST00000578301 84 ntBASIC0.97□□□□□ -2.25
ECHDC1Q9NTX5 MIR6740-201ENST00000618268 113 ntBASIC0.97□□□□□ -2.25
ECHDC1Q9NTX5 Y_RNA.778-201ENST00000620203 90 ntBASIC0.97□□□□□ -2.25
ECHDC1Q9NTX5 RNU6-349P-201ENST00000362402 107 ntBASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 SNORA1.1-201ENST00000364671 133 ntBASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-396P-201ENST00000365369 105 ntBASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 SNORA20-201ENST00000384662 132 ntBASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 MIR598-201ENST00000384868 97 ntBASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 SNORD37.2-201ENST00000391075 66 ntBASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-613P-201ENST00000410412 108 ntBASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-346P-201ENST00000516288 111 ntBASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.96□□□□□ -2.26
ECHDC1Q9NTX5 RNU1-133P-201ENST00000364867 167 ntBASIC0.95□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-449P-201ENST00000383914 107 ntBASIC0.95□□□□□ -2.26
ECHDC1Q9NTX5 RNU7-90P-201ENST00000459216 62 ntBASIC0.95□□□□□ -2.26
ECHDC1Q9NTX5 RNU7-80P-201ENST00000459562 61 ntBASIC0.95□□□□□ -2.26
ECHDC1Q9NTX5 RNU11-2P-201ENST00000516898 142 ntBASIC0.95□□□□□ -2.26
ECHDC1Q9NTX5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
ECHDC1Q9NTX5 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 MIR302B-201ENST00000362188 73 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-580P-201ENST00000365159 107 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 SNORA2B-201ENST00000384583 137 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-747P-201ENST00000390928 104 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 SNORD12-201ENST00000391002 90 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-241P-201ENST00000391148 104 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-177P-201ENST00000411257 104 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 SNORA25.12-201ENST00000516202 82 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 MIR2115-201ENST00000516657 100 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 RNA5SP480-201ENST00000516840 109 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 AC106800.4-201ENST00000614905 153 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 AC021613.1-201ENST00000623880 111 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 MIR6841-201ENST00000637129 72 ntBASIC0.94□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-369P-201ENST00000362515 102 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-209P-201ENST00000384118 107 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.506-201ENST00000384494 102 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 POLR2J4-204ENST00000418424 324 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 AC004941.2-201ENST00000427009 228 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-1212P-201ENST00000517023 104 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 MIR5000-201ENST00000577717 103 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 AC108081.1-201ENST00000604358 221 ntBASIC0.93□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.171-201ENST00000363760 102 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.215-201ENST00000364204 112 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 SNORD113.3-201ENST00000364630 78 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.294-201ENST00000364916 102 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.464-201ENST00000384282 110 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 SNORD38B-201ENST00000384690 67 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 MIR7-2-201ENST00000384970 110 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 MIR569-201ENST00000385228 96 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.584-201ENST00000391090 114 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 RNU7-200P-201ENST00000516105 62 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 AC013244.2-201ENST00000603396 103 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 SNORD38B-202ENST00000625943 69 ntBASIC0.92□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.168-201ENST00000363740 102 ntBASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.400-201ENST00000383963 111 ntBASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 RNY1P6-201ENST00000384193 109 ntBASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 SNORD83.1-201ENST00000411362 77 ntBASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 RPS3AP1-201ENST00000413190 320 ntBASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-240P-201ENST00000516098 97 ntBASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 Y_RNA.757-201ENST00000578934 114 ntBASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.91□□□□□ -2.26
ECHDC1Q9NTX5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 Y_RNA.454-201ENST00000384224 113 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 MIR588-201ENST00000384900 83 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 MT-TN-201ENST00000387400 73 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 snoU13.2-201ENST00000459201 104 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 RNU2-35P-201ENST00000516446 142 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 RNU6-426P-201ENST00000516464 97 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 IGKV1-22-201ENST00000524313 326 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 MIR4264-201ENST00000583520 66 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 MIR6866-201ENST00000638146 69 ntBASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
ECHDC1Q9NTX5 AC010332.2-201ENST00000613083 1904 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 SNORA22.1-201ENST00000362701 134 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 RNU6-774P-201ENST00000363238 107 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 RNU6-915P-201ENST00000364943 103 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 Y_RNA.430-201ENST00000384081 110 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 Y_RNA.470-201ENST00000384307 117 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 RNU6-342P-201ENST00000384521 104 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 MIR563-201ENST00000385080 79 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 RNA5SP144-201ENST00000410846 116 ntBASIC0.89□□□□□ -2.27
ECHDC1Q9NTX5 AL512326.2-201ENST00000426359 151 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms