Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 AC020891.4-201ENST00000605745 93 ntBASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 MIR1-1-201ENST00000362147 71 ntBASIC0.84□□□□□ -2.27
SMC4Q9NTJ3 MIR588-201ENST00000384900 83 ntBASIC0.84□□□□□ -2.27
SMC4Q9NTJ3 snosnR66.1-201ENST00000391095 99 ntBASIC0.84□□□□□ -2.27
SMC4Q9NTJ3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.84□□□□□ -2.27
SMC4Q9NTJ3 RNU6-388P-201ENST00000517012 105 ntBASIC0.84□□□□□ -2.27
SMC4Q9NTJ3 RNU6-389P-201ENST00000517048 105 ntBASIC0.84□□□□□ -2.27
SMC4Q9NTJ3 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
SMC4Q9NTJ3 MTND5P32-201ENST00000560711 1802 ntBASIC0.84□□□□□ -2.28
SMC4Q9NTJ3 AC010332.2-201ENST00000613083 1904 ntBASIC0.83□□□□□ -2.28
SMC4Q9NTJ3 Y_RNA.489-201ENST00000384410 101 ntBASIC0.83□□□□□ -2.28
SMC4Q9NTJ3 RPS26P5-201ENST00000418544 335 ntBASIC0.83□□□□□ -2.28
SMC4Q9NTJ3 COX6CP6-201ENST00000490840 228 ntBASIC0.83□□□□□ -2.28
SMC4Q9NTJ3 MIR4771-2-201ENST00000577758 74 ntBASIC0.83□□□□□ -2.28
SMC4Q9NTJ3 MIR4771-1-201ENST00000582617 74 ntBASIC0.83□□□□□ -2.28
SMC4Q9NTJ3 MIR302B-201ENST00000362188 73 ntBASIC0.82□□□□□ -2.28
SMC4Q9NTJ3 RNU6-1020P-201ENST00000363684 107 ntBASIC0.82□□□□□ -2.28
SMC4Q9NTJ3 Y_RNA.435-201ENST00000384095 112 ntBASIC0.82□□□□□ -2.28
SMC4Q9NTJ3 SNORD105-201ENST00000386910 85 ntBASIC0.82□□□□□ -2.28
SMC4Q9NTJ3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.82□□□□□ -2.28
SMC4Q9NTJ3 snoU13.2-201ENST00000459201 104 ntBASIC0.82□□□□□ -2.28
SMC4Q9NTJ3 RNU6-1149P-201ENST00000516810 97 ntBASIC0.82□□□□□ -2.28
SMC4Q9NTJ3 Y_RNA.233-201ENST00000364407 101 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 RNU6-1082P-201ENST00000364574 107 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 Y_RNA.297-201ENST00000364950 91 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 RNU6-768P-201ENST00000384683 107 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 MIR624-201ENST00000385217 97 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 RNA5SP127-201ENST00000411051 133 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 MIR4431-201ENST00000579990 94 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 Z83818.1-201ENST00000603584 150 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 AC141273.2-201ENST00000618989 130 ntBASIC0.81□□□□□ -2.28
SMC4Q9NTJ3 RNU7-80P-201ENST00000459562 61 ntBASIC0.8□□□□□ -2.28
SMC4Q9NTJ3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.8□□□□□ -2.28
SMC4Q9NTJ3 RNY1P11-201ENST00000363759 113 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 Y_RNA.401-201ENST00000383965 117 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 Y_RNA.521-201ENST00000384560 114 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 MIR563-201ENST00000385080 79 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 RNU6-747P-201ENST00000390928 104 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 RNU1-119P-201ENST00000391122 165 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 RNU6-241P-201ENST00000391148 104 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 RNU6-177P-201ENST00000411257 104 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 AC244098.3-201ENST00000424803 96 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 Y_RNA.644-201ENST00000459006 113 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 Y_RNA.674-201ENST00000516362 113 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 AC011195.1-201ENST00000578177 177 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 MIR4676-201ENST00000583078 72 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
SMC4Q9NTJ3 MIR30D-201ENST00000362283 70 ntBASIC0.78□□□□□ -2.28
SMC4Q9NTJ3 RNU4-16P-201ENST00000364737 141 ntBASIC0.78□□□□□ -2.28
SMC4Q9NTJ3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.78□□□□□ -2.28
SMC4Q9NTJ3 MIR4804-201ENST00000581683 73 ntBASIC0.78□□□□□ -2.28
SMC4Q9NTJ3 SNORA25.7-201ENST00000364375 127 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 MIR520F-201ENST00000384824 87 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 MT-TG-201ENST00000387429 68 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 RNU6-733P-201ENST00000410759 104 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 RNU6-138P-201ENST00000515952 107 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 RNU6-977P-201ENST00000516411 103 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 AC021613.1-201ENST00000623880 111 ntBASIC0.77□□□□□ -2.29
SMC4Q9NTJ3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 Y_RNA.52-201ENST00000362760 96 ntBASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 RNU6-312P-201ENST00000364629 107 ntBASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 RNU5E-9P-201ENST00000411164 104 ntBASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 RNU7-56P-201ENST00000458744 62 ntBASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 AC008608.1-201ENST00000603910 127 ntBASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 MIR6841-201ENST00000637129 72 ntBASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SMC4Q9NTJ3 RNY1P8-201ENST00000383970 114 ntBASIC0.75□□□□□ -2.29
SMC4Q9NTJ3 Y_RNA.454-201ENST00000384224 113 ntBASIC0.75□□□□□ -2.29
SMC4Q9NTJ3 Y_RNA.476-201ENST00000384347 108 ntBASIC0.75□□□□□ -2.29
SMC4Q9NTJ3 MIR193B-201ENST00000384907 83 ntBASIC0.75□□□□□ -2.29
SMC4Q9NTJ3 MIR520H-201ENST00000385126 88 ntBASIC0.75□□□□□ -2.29
SMC4Q9NTJ3 MIR3658-201ENST00000636291 56 ntBASIC0.75□□□□□ -2.29
SMC4Q9NTJ3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
SMC4Q9NTJ3 Y_RNA.430-201ENST00000384081 110 ntBASIC0.74□□□□□ -2.29
SMC4Q9NTJ3 RNU6-588P-201ENST00000410281 105 ntBASIC0.74□□□□□ -2.29
SMC4Q9NTJ3 MIR18B-201ENST00000454574 71 ntBASIC0.74□□□□□ -2.29
SMC4Q9NTJ3 RNU7-185P-201ENST00000459215 60 ntBASIC0.74□□□□□ -2.29
SMC4Q9NTJ3 RNU6-861P-201ENST00000516745 106 ntBASIC0.74□□□□□ -2.29
SMC4Q9NTJ3 AP002392.1-201ENST00000537692 208 ntBASIC0.74□□□□□ -2.29
SMC4Q9NTJ3 SNORA22.1-201ENST00000362701 134 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 RNU6-508P-201ENST00000363231 103 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 RNU6-200P-201ENST00000364743 107 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 Y_RNA.515-201ENST00000384535 112 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 MIR92A1-201ENST00000385233 78 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 Y_RNA.793-201ENST00000411222 111 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 RNA5SP236-201ENST00000516169 116 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 RNU7-70P-201ENST00000516941 66 ntBASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 MIR1273G-201ENST00000577677 100 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms