Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VTA1Q9NP79 Y_RNA.116-201ENST00000363292 103 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 Y_RNA.355-201ENST00000365462 98 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 POLR2J4-204ENST00000418424 324 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 RNU6-1211P-201ENST00000459179 105 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 RNU7-90P-201ENST00000459216 62 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 RNU7-21P-201ENST00000459430 62 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 RN7SKP19-201ENST00000516016 252 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 RNA5SP102-201ENST00000516865 106 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 MIR6516-201ENST00000630554 81 ntBASIC1.49□□□□□ -2.17
VTA1Q9NP79 Y_RNA.168-201ENST00000363740 102 ntBASIC1.48□□□□□ -2.17
VTA1Q9NP79 RNU6-580P-201ENST00000365159 107 ntBASIC1.48□□□□□ -2.17
VTA1Q9NP79 SNORA25-201ENST00000384384 134 ntBASIC1.48□□□□□ -2.17
VTA1Q9NP79 RNU6-959P-201ENST00000384671 107 ntBASIC1.48□□□□□ -2.17
VTA1Q9NP79 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
VTA1Q9NP79 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.48□□□□□ -2.17
VTA1Q9NP79 RNU7-45P-201ENST00000459460 63 ntBASIC1.48□□□□□ -2.17
VTA1Q9NP79 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
VTA1Q9NP79 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
VTA1Q9NP79 Y_RNA.298-201ENST00000364960 107 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 Y_RNA.366-201ENST00000365540 102 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 MIR518E-201ENST00000385252 88 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VTA1Q9NP79 RNU6-1190P-201ENST00000410811 104 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 HMGN1P33-201ENST00000432945 451 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 RNU7-164P-201ENST00000459221 62 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 RNU7-113P-201ENST00000459273 62 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 AC113410.1-201ENST00000505029 247 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 RNU6-406P-201ENST00000516470 107 ntBASIC1.47□□□□□ -2.17
VTA1Q9NP79 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
VTA1Q9NP79 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.47□□□□□ -2.17
VTA1Q9NP79 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VTA1Q9NP79 Y_RNA.224-201ENST00000364308 111 ntBASIC1.46□□□□□ -2.18
VTA1Q9NP79 SNORD113.3-201ENST00000364630 78 ntBASIC1.46□□□□□ -2.18
VTA1Q9NP79 RNU4-16P-201ENST00000364737 141 ntBASIC1.46□□□□□ -2.18
VTA1Q9NP79 SNORD111-201ENST00000408139 94 ntBASIC1.46□□□□□ -2.18
VTA1Q9NP79 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.46□□□□□ -2.18
VTA1Q9NP79 RNU6-508P-201ENST00000363231 103 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 SNORD113-1-201ENST00000365321 69 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 Y_RNA.531-201ENST00000384589 121 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 MIR759-201ENST00000390224 91 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 AC090844.1-201ENST00000422019 156 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 AC244023.1-201ENST00000426884 112 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 AC008267.6-201ENST00000441664 139 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 snoU13.2-201ENST00000459201 104 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 snoU13.18-201ENST00000459483 104 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 RNU6-971P-201ENST00000516920 106 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 HSPE1P19-201ENST00000603327 295 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 AC242498.1-201ENST00000604134 111 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 AC108081.1-201ENST00000604358 221 ntBASIC1.45□□□□□ -2.18
VTA1Q9NP79 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VTA1Q9NP79 Y_RNA.191-201ENST00000363972 113 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 Y_RNA.346-201ENST00000365385 112 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 Y_RNA.363-201ENST00000365529 113 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 RNU6-1117P-201ENST00000384525 104 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 SNORA75.2-201ENST00000391138 150 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 SNORA75.3-201ENST00000391231 150 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 COX6CP6-201ENST00000490840 228 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 RNU6-62P-201ENST00000516526 102 ntBASIC1.44□□□□□ -2.18
VTA1Q9NP79 RNA5SP327-201ENST00000362494 101 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 SNORD116-14-201ENST00000383894 92 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 SNORD116-17-201ENST00000383929 92 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 SNORD116-15-201ENST00000384445 92 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 SNORD116-19-201ENST00000384729 92 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 AC004812.1-201ENST00000540773 146 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 AC106800.4-201ENST00000614905 153 ntBASIC1.43□□□□□ -2.18
VTA1Q9NP79 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 Y_RNA.294-201ENST00000364916 102 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 Y_RNA.330-201ENST00000365230 109 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 MIR19B1-201ENST00000384829 87 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 AC063976.4-201ENST00000421971 163 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 MIR18B-201ENST00000454574 71 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 RNU2-35P-201ENST00000516446 142 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 Y_RNA.712-201ENST00000517011 92 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 MIR4452-201ENST00000583004 71 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 AC027335.2-201ENST00000624030 375 ntBASIC1.42□□□□□ -2.18
VTA1Q9NP79 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
VTA1Q9NP79 Y_RNA.71-201ENST00000362892 104 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 Y_RNA.213-201ENST00000364178 111 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 MIR489-201ENST00000384923 84 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 MIRLET7F2-201ENST00000385277 83 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 RNU6-1086P-201ENST00000410930 100 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 RNU7-62P-201ENST00000458856 62 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 RNU7-123P-201ENST00000515911 60 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 RNY4P20-201ENST00000516678 93 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 AC012676.2-201ENST00000619258 186 ntBASIC1.41□□□□□ -2.18
VTA1Q9NP79 Y_RNA.127-201ENST00000363386 109 ntBASIC1.4□□□□□ -2.19
VTA1Q9NP79 Y_RNA.198-201ENST00000364013 98 ntBASIC1.4□□□□□ -2.19
VTA1Q9NP79 SNORD58C-201ENST00000365223 64 ntBASIC1.4□□□□□ -2.19
VTA1Q9NP79 MIR588-201ENST00000384900 83 ntBASIC1.4□□□□□ -2.19
VTA1Q9NP79 MIR563-201ENST00000385080 79 ntBASIC1.4□□□□□ -2.19
VTA1Q9NP79 MT-TF-201ENST00000387314 71 ntBASIC1.4□□□□□ -2.19
VTA1Q9NP79 RNA5SP237-201ENST00000410414 113 ntBASIC1.4□□□□□ -2.19
VTA1Q9NP79 AC036111.3-201ENST00000526389 112 ntBASIC1.4□□□□□ -2.19
VTA1Q9NP79 U6.95-201ENST00000636931 70 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms