Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 Z97988.1-201ENST00000637697 135 ntBASIC2.07□□□□□ -2.08
BCAS3Q9H6U6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
BCAS3Q9H6U6 SNORA25.9-201ENST00000365087 128 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 SNORD77B-201ENST00000391112 67 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 RNU6-321P-201ENST00000410912 106 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 RNA5SP33-201ENST00000516687 98 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 RNU2-19P-201ENST00000517288 84 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 AC245884.12-201ENST00000615364 59 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 MALAT1.1-201ENST00000618249 95 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 AC084768.2-201ENST00000622736 221 ntBASIC2.06□□□□□ -2.08
BCAS3Q9H6U6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
BCAS3Q9H6U6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
BCAS3Q9H6U6 Y_RNA.342-201ENST00000365352 113 ntBASIC2.05□□□□□ -2.08
BCAS3Q9H6U6 RNU6-1190P-201ENST00000410811 104 ntBASIC2.05□□□□□ -2.08
BCAS3Q9H6U6 RPS3AP1-201ENST00000413190 320 ntBASIC2.05□□□□□ -2.08
BCAS3Q9H6U6 FAM106DP-201ENST00000586416 501 ntBASIC2.05□□□□□ -2.08
BCAS3Q9H6U6 Y_RNA.155-201ENST00000363632 101 ntBASIC2.04□□□□□ -2.08
BCAS3Q9H6U6 RNU6-679P-201ENST00000391003 106 ntBASIC2.04□□□□□ -2.08
BCAS3Q9H6U6 SNORD13-201ENST00000459299 104 ntBASIC2.04□□□□□ -2.08
BCAS3Q9H6U6 RNU6-917P-201ENST00000516294 104 ntBASIC2.04□□□□□ -2.08
BCAS3Q9H6U6 RNU6-616P-201ENST00000384353 107 ntBASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 AC004941.2-201ENST00000427009 228 ntBASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 RNA5SP57-201ENST00000459463 123 ntBASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 RNU6-250P-201ENST00000516958 103 ntBASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 MIR8070-201ENST00000616510 88 ntBASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 MIR8065-201ENST00000620577 100 ntBASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 AC008133.2-201ENST00000624540 351 ntBASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
BCAS3Q9H6U6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
BCAS3Q9H6U6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 RNU6-1313P-201ENST00000362622 102 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 Y_RNA.354-201ENST00000365448 111 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 RNU6-1201P-201ENST00000384227 107 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 MIR605-201ENST00000385078 83 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 RNY4P29-201ENST00000410801 97 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 AC004965.1-201ENST00000413033 213 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 TRMT112P2-201ENST00000512910 132 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 RNU7-35P-201ENST00000517174 62 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 MIR4764-201ENST00000580680 88 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.02□□□□□ -2.09
BCAS3Q9H6U6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
BCAS3Q9H6U6 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
BCAS3Q9H6U6 SNORA1.1-201ENST00000364671 133 ntBASIC2.01□□□□□ -2.09
BCAS3Q9H6U6 RNA5SP190-201ENST00000365222 118 ntBASIC2.01□□□□□ -2.09
BCAS3Q9H6U6 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
BCAS3Q9H6U6 RNU6-203P-201ENST00000384038 104 ntBASIC2.01□□□□□ -2.09
BCAS3Q9H6U6 AL513534.2-201ENST00000603836 250 ntBASIC2.01□□□□□ -2.09
BCAS3Q9H6U6 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.01□□□□□ -2.09
BCAS3Q9H6U6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
BCAS3Q9H6U6 RNU6-170P-201ENST00000362832 104 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 Y_RNA.96-201ENST00000363092 109 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 RNU6-762P-201ENST00000517107 102 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 MIR4439-201ENST00000583746 80 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 AL359821.1-201ENST00000605519 182 ntBASIC2□□□□□ -2.09
BCAS3Q9H6U6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
BCAS3Q9H6U6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 SNORA16.1-201ENST00000364597 132 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 SNORD115-35-201ENST00000365122 82 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 RNY1P7-201ENST00000384743 110 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 SNORA26.2-201ENST00000390922 122 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 BTF3P4-201ENST00000418852 495 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 snoU13.18-201ENST00000459483 104 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 RNU6-521P-201ENST00000516663 105 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
BCAS3Q9H6U6 SNORD45B-201ENST00000364617 72 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 SNORD48-201ENST00000364953 64 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 MIR520C-201ENST00000385005 87 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 HMGN1P33-201ENST00000432945 451 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 JTBP1-201ENST00000441314 247 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 RNU6-322P-201ENST00000516010 103 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 MIR4419B-201ENST00000577260 68 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 AC012531.4-201ENST00000616509 177 ntBASIC1.98□□□□□ -2.09
BCAS3Q9H6U6 Y_RNA.95-201ENST00000363079 95 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 Y_RNA.290-201ENST00000364879 114 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 RNU6-820P-201ENST00000384273 107 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 SNORA18-201ENST00000384416 132 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 SNORA7.5-201ENST00000410672 110 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 RNU6-1086P-201ENST00000410930 100 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 RNU6-602P-201ENST00000411155 105 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 AC026421.1-201ENST00000519101 163 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms