Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.49□□□□□ -2.01
PHACTR1Q9C0D0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PHACTR1Q9C0D0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 RNU6-1244P-201ENST00000363614 108 ntBASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 Y_RNA.567-201ENST00000384736 106 ntBASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 RNU6-1237P-201ENST00000384777 107 ntBASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 AC019129.1-201ENST00000403786 261 ntBASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 MIR1255A-201ENST00000408338 113 ntBASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 RNA5SP225-201ENST00000410874 135 ntBASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 AL161935.2-201ENST00000414627 60 ntBASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 RNU7-171P-201ENST00000459581 62 ntBASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PHACTR1Q9C0D0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 RNA5SP48-201ENST00000363969 126 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 SNORD114-30-201ENST00000364448 72 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 RNY1P13-201ENST00000365030 105 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 RNA5SP237-201ENST00000410414 113 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 AC108938.1-201ENST00000451204 136 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 AC009474.2-201ENST00000451383 136 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 SNORD111.1-201ENST00000516421 86 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 RNA5SP395-201ENST00000516567 118 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 MIR4319-201ENST00000577285 85 ntBASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
PHACTR1Q9C0D0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
PHACTR1Q9C0D0 RNA5SP259-201ENST00000365541 109 ntBASIC2.46□□□□□ -2.02
PHACTR1Q9C0D0 MIR513A1-201ENST00000385138 129 ntBASIC2.46□□□□□ -2.02
PHACTR1Q9C0D0 SPINT5P-201ENST00000448174 155 ntBASIC2.46□□□□□ -2.02
PHACTR1Q9C0D0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.46□□□□□ -2.02
PHACTR1Q9C0D0 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
PHACTR1Q9C0D0 AC025521.1-201ENST00000621624 286 ntBASIC2.46□□□□□ -2.02
PHACTR1Q9C0D0 AP001362.1-201ENST00000625165 124 ntBASIC2.46□□□□□ -2.02
PHACTR1Q9C0D0 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
PHACTR1Q9C0D0 Y_RNA.426-201ENST00000384068 113 ntBASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 MIR196B-201ENST00000384852 84 ntBASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 AL359511.1-201ENST00000402970 211 ntBASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 RNA5SP508-201ENST00000411327 119 ntBASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 JTBP1-201ENST00000441314 247 ntBASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 AC055731.1-201ENST00000474387 401 ntBASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 AC141846.1-201ENST00000568348 142 ntBASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 MIR4666B-201ENST00000578142 81 ntBASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PHACTR1Q9C0D0 Y_RNA.173-201ENST00000363776 113 ntBASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 RNA5SP138-201ENST00000365098 114 ntBASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 RNU6-787P-201ENST00000384032 107 ntBASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 HMGN2P38-201ENST00000423806 265 ntBASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 AL513328.1-201ENST00000446460 224 ntBASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 RNA5SP320-201ENST00000516263 124 ntBASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 AC104984.5-201ENST00000586878 94 ntBASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 AL662814.1-201ENST00000617364 121 ntBASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PHACTR1Q9C0D0 AC062016.1-201ENST00000355719 319 ntBASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 SNORD41-201ENST00000386967 70 ntBASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 RNA5SP212-201ENST00000391223 107 ntBASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 MTND5P40-201ENST00000559945 246 ntBASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 AC133485.1-201ENST00000567176 124 ntBASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 AC012676.2-201ENST00000619258 186 ntBASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PHACTR1Q9C0D0 RNU6-509P-201ENST00000363519 107 ntBASIC2.42□□□□□ -2.02
PHACTR1Q9C0D0 SNORD23.1-201ENST00000408212 104 ntBASIC2.42□□□□□ -2.02
PHACTR1Q9C0D0 Y_RNA.609-201ENST00000410669 89 ntBASIC2.42□□□□□ -2.02
PHACTR1Q9C0D0 Y_RNA.611-201ENST00000410682 108 ntBASIC2.42□□□□□ -2.02
PHACTR1Q9C0D0 RNU1-98P-201ENST00000458992 160 ntBASIC2.42□□□□□ -2.02
PHACTR1Q9C0D0 AL357312.1-201ENST00000603879 298 ntBASIC2.42□□□□□ -2.02
PHACTR1Q9C0D0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PHACTR1Q9C0D0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 AL596028.1-201ENST00000326971 197 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 MIRLET7G-201ENST00000362280 84 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 Y_RNA.4-201ENST00000362333 112 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 RNU4-82P-201ENST00000362443 140 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 RNU6-633P-201ENST00000362612 103 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 AC027119.1-201ENST00000440877 241 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 AC090255.1-201ENST00000495779 349 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 RNA5SP445-201ENST00000515889 115 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 MIR6715A-201ENST00000615929 79 ntBASIC2.41□□□□□ -2.02
PHACTR1Q9C0D0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.4□□□□□ -2.02
PHACTR1Q9C0D0 RNA5SP276-201ENST00000362580 94 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 RNU6-1125P-201ENST00000363601 107 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 Y_RNA.437-201ENST00000384113 113 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 RNU6-480P-201ENST00000384332 107 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 AC244023.1-201ENST00000426884 112 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 snoU13.2-201ENST00000459201 104 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 RNU6-922P-201ENST00000516753 99 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 MIR5007-201ENST00000583098 95 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 AC242498.1-201ENST00000604134 111 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 MIR548BB-201ENST00000626714 66 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 AC006160.2-201ENST00000637708 154 ntBASIC2.4□□□□□ -2.03
PHACTR1Q9C0D0 Y_RNA.191-201ENST00000363972 113 ntBASIC2.39□□□□□ -2.03
PHACTR1Q9C0D0 RNU6-949P-201ENST00000384040 107 ntBASIC2.39□□□□□ -2.03
PHACTR1Q9C0D0 RNU6-279P-201ENST00000391297 101 ntBASIC2.39□□□□□ -2.03
PHACTR1Q9C0D0 PRELID3BP2-201ENST00000605362 201 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 269.2 ms