Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 AL160004.2-201ENST00000432935 350 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.21□□□□□ -2.6
TRIM4Q9C037 AC024614.3-201ENST00000637860 256 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 RNU6-801P-201ENST00000364087 105 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 RNU6-900P-201ENST00000384498 102 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 MIR181B2-201ENST00000385004 89 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 MIR8485-201ENST00000401372 91 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 HLA-S-202ENST00000425174 53 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 AF228730.3-201ENST00000436691 102 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 AC005899.2-201ENST00000584353 90 ntBASIC-1.22□□□□□ -2.6
TRIM4Q9C037 RNU6-593P-201ENST00000364716 112 ntBASIC-1.23□□□□□ -2.61
TRIM4Q9C037 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.23□□□□□ -2.61
TRIM4Q9C037 MIR539-201ENST00000365690 78 ntBASIC-1.23□□□□□ -2.61
TRIM4Q9C037 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.23□□□□□ -2.61
TRIM4Q9C037 MIR4662B-201ENST00000579498 81 ntBASIC-1.23□□□□□ -2.61
TRIM4Q9C037 uc_338.10-201ENST00000621872 182 ntBASIC-1.23□□□□□ -2.61
TRIM4Q9C037 RNU6-888P-201ENST00000363010 101 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 RNA5SP133-201ENST00000363368 119 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 SNORA18-201ENST00000384416 132 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 DEFB108C-201ENST00000400154 252 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 AL603914.1-201ENST00000401964 204 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 SNORD77.4-201ENST00000516158 81 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 AC100767.1-201ENST00000528178 123 ntBASIC-1.24□□□□□ -2.61
TRIM4Q9C037 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 MT-TY-201ENST00000387409 66 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
TRIM4Q9C037 RNU6-308P-201ENST00000390957 107 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 RNU6-383P-201ENST00000410864 94 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 RNU7-74P-201ENST00000459104 62 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.25□□□□□ -2.61
TRIM4Q9C037 TPTEP1-208ENST00000636884 213 ntBASIC-1.25□□□□□ -2.61
TRIM4Q9C037 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 RNU6-259P-201ENST00000383999 107 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 MIR147A-201ENST00000385079 72 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 RNU6-373P-201ENST00000411247 98 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.26□□□□□ -2.61
TRIM4Q9C037 MTND3P10-201ENST00000450967 341 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.26□□□□□ -2.61
TRIM4Q9C037 AC006362.1-201ENST00000567392 174 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.26□□□□□ -2.61
TRIM4Q9C037 MIR8068-201ENST00000618032 68 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 AC099654.14-201ENST00000638599 341 ntBASIC-1.26□□□□□ -2.61
TRIM4Q9C037 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.27□□□□□ -2.61
TRIM4Q9C037 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.27□□□□□ -2.61
TRIM4Q9C037 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.27□□□□□ -2.61
TRIM4Q9C037 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.27□□□□□ -2.61
TRIM4Q9C037 MIR6841-201ENST00000637129 72 ntBASIC-1.27□□□□□ -2.61
TRIM4Q9C037 MIR1321-201ENST00000637766 79 ntBASIC-1.27□□□□□ -2.61
TRIM4Q9C037 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 RNU6-905P-201ENST00000384434 107 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 RNU7-134P-201ENST00000458997 64 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 RNU6-307P-201ENST00000516743 106 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 RNU6-365P-201ENST00000517113 106 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 MIR548H5-201ENST00000580314 60 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 MIR548AE1-201ENST00000583292 70 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 MIR1246-201ENST00000636535 73 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 U6.109-201ENST00000636749 87 ntBASIC-1.28□□□□□ -2.61
TRIM4Q9C037 RNU6-226P-201ENST00000363778 107 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU6-899P-201ENST00000363947 107 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU1-141P-201ENST00000364623 158 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU6-144P-201ENST00000383951 107 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU7-169P-201ENST00000459456 61 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 RNU6-732P-201ENST00000516033 103 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 MIR6129-201ENST00000616087 109 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 U6.92-201ENST00000636464 89 ntBASIC-1.29□□□□□ -2.62
TRIM4Q9C037 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.3□□□□□ -2.62
TRIM4Q9C037 SNORA22.1-201ENST00000362701 134 ntBASIC-1.3□□□□□ -2.62
TRIM4Q9C037 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.3□□□□□ -2.62
TRIM4Q9C037 RNU6-154P-201ENST00000384306 106 ntBASIC-1.3□□□□□ -2.62
TRIM4Q9C037 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.3□□□□□ -2.62
TRIM4Q9C037 RPS3AP52-201ENST00000435639 297 ntBASIC-1.3□□□□□ -2.62
TRIM4Q9C037 RNU7-10P-201ENST00000607194 63 ntBASIC-1.3□□□□□ -2.62
TRIM4Q9C037 AC069503.3-201ENST00000618674 145 ntBASIC-1.3□□□□□ -2.62
TRIM4Q9C037 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.31□□□□□ -2.62
TRIM4Q9C037 RNU6-119P-201ENST00000364882 107 ntBASIC-1.31□□□□□ -2.62
TRIM4Q9C037 SNORD115-35-201ENST00000365122 82 ntBASIC-1.31□□□□□ -2.62
TRIM4Q9C037 SNORA20-201ENST00000384662 132 ntBASIC-1.31□□□□□ -2.62
TRIM4Q9C037 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.31□□□□□ -2.62
TRIM4Q9C037 AC093783.1-201ENST00000612976 329 ntBASIC-1.31□□□□□ -2.62
TRIM4Q9C037 PISRT1.1-201ENST00000616930 107 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms