Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR4305-201ENST00000583252 102 ntBASIC1.32□□□□□ -2.2
TRIM54Q9BYV2 MIR6841-201ENST00000637129 72 ntBASIC1.32□□□□□ -2.2
TRIM54Q9BYV2 AC008163.1-202ENST00000636004 2889 ntBASIC1.31□□□□□ -2.2
TRIM54Q9BYV2 Y_RNA.114-201ENST00000363265 113 ntBASIC1.31□□□□□ -2.2
TRIM54Q9BYV2 SNORA2B-201ENST00000384583 137 ntBASIC1.31□□□□□ -2.2
TRIM54Q9BYV2 RNU6-205P-201ENST00000390858 107 ntBASIC1.31□□□□□ -2.2
TRIM54Q9BYV2 RNA5SP144-201ENST00000410846 116 ntBASIC1.31□□□□□ -2.2
TRIM54Q9BYV2 AC063976.4-201ENST00000421971 163 ntBASIC1.31□□□□□ -2.2
TRIM54Q9BYV2 AL137067.1-201ENST00000615933 120 ntBASIC1.31□□□□□ -2.2
TRIM54Q9BYV2 Y_RNA.366-201ENST00000365540 102 ntBASIC1.3□□□□□ -2.2
TRIM54Q9BYV2 Y_RNA.586-201ENST00000391146 98 ntBASIC1.3□□□□□ -2.2
TRIM54Q9BYV2 POLR2J4-204ENST00000418424 324 ntBASIC1.3□□□□□ -2.2
TRIM54Q9BYV2 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
TRIM54Q9BYV2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 Y_RNA.294-201ENST00000364916 102 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 RNA5SP95-201ENST00000410319 137 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 AC244023.1-201ENST00000426884 112 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 TMSB4XP3-201ENST00000445144 114 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 RNU7-62P-201ENST00000458856 62 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 RNU6-1211P-201ENST00000459179 105 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 RNU7-164P-201ENST00000459221 62 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 RNU7-113P-201ENST00000459273 62 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 AC242498.1-201ENST00000604134 111 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 AC108081.1-201ENST00000604358 221 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRIM54Q9BYV2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRIM54Q9BYV2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.28□□□□□ -2.2
TRIM54Q9BYV2 RNU6-42P-201ENST00000384165 107 ntBASIC1.28□□□□□ -2.2
TRIM54Q9BYV2 MIR7-2-201ENST00000384970 110 ntBASIC1.28□□□□□ -2.2
TRIM54Q9BYV2 AL158147.1-201ENST00000443970 75 ntBASIC1.28□□□□□ -2.2
TRIM54Q9BYV2 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
TRIM54Q9BYV2 AC023827.1-201ENST00000569247 97 ntBASIC1.28□□□□□ -2.2
TRIM54Q9BYV2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRIM54Q9BYV2 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
TRIM54Q9BYV2 RNA5SP237-201ENST00000410414 113 ntBASIC1.27□□□□□ -2.21
TRIM54Q9BYV2 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
TRIM54Q9BYV2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 RNU6-392P-201ENST00000364926 101 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 Y_RNA.298-201ENST00000364960 107 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 MIR588-201ENST00000384900 83 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 SNORD12C-201ENST00000386307 89 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 MIR1276-201ENST00000408707 83 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 snoU13.2-201ENST00000459201 104 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 RNU7-95P-201ENST00000459222 64 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 RNU6-971P-201ENST00000516920 106 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 AC036111.3-201ENST00000526389 112 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 SNORA4-201ENST00000584302 138 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 AL078603.1-201ENST00000603824 313 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 AC106800.4-201ENST00000614905 153 ntBASIC1.26□□□□□ -2.21
TRIM54Q9BYV2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 Y_RNA.280-201ENST00000364765 112 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 RNU6-994P-201ENST00000410507 111 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 AC113410.1-201ENST00000505029 247 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 RNU7-123P-201ENST00000515911 60 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 RN7SKP19-201ENST00000516016 252 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 RNA5SP220-201ENST00000516298 104 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 RNU2-35P-201ENST00000516446 142 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 RNY4P20-201ENST00000516678 93 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 AC012676.2-201ENST00000619258 186 ntBASIC1.25□□□□□ -2.21
TRIM54Q9BYV2 RNU6-235P-201ENST00000362644 107 ntBASIC1.24□□□□□ -2.21
TRIM54Q9BYV2 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
TRIM54Q9BYV2 RNU6-580P-201ENST00000365159 107 ntBASIC1.24□□□□□ -2.21
TRIM54Q9BYV2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.24□□□□□ -2.21
TRIM54Q9BYV2 RNA5SP33-201ENST00000516687 98 ntBASIC1.24□□□□□ -2.21
TRIM54Q9BYV2 AC004812.1-201ENST00000540773 146 ntBASIC1.24□□□□□ -2.21
TRIM54Q9BYV2 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
TRIM54Q9BYV2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.23□□□□□ -2.21
TRIM54Q9BYV2 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
TRIM54Q9BYV2 AC067940.1-201ENST00000458411 300 ntBASIC1.23□□□□□ -2.21
TRIM54Q9BYV2 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
TRIM54Q9BYV2 RNU6-1061P-201ENST00000516530 99 ntBASIC1.23□□□□□ -2.21
TRIM54Q9BYV2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.23□□□□□ -2.21
TRIM54Q9BYV2 MIR6740-201ENST00000618268 113 ntBASIC1.23□□□□□ -2.21
TRIM54Q9BYV2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 SNORA18-201ENST00000384416 132 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 RNA5SP136-201ENST00000410906 107 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 AL512326.2-201ENST00000426359 151 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 MIR4452-201ENST00000583004 71 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 RNU6-94P-201ENST00000607728 107 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 MIR6734-201ENST00000621166 68 ntBASIC1.22□□□□□ -2.21
TRIM54Q9BYV2 SNORD115-2-201ENST00000362842 82 ntBASIC1.21□□□□□ -2.22
TRIM54Q9BYV2 SNORD115-20-201ENST00000365099 82 ntBASIC1.21□□□□□ -2.22
TRIM54Q9BYV2 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
TRIM54Q9BYV2 MIR1263-201ENST00000408324 86 ntBASIC1.21□□□□□ -2.22
TRIM54Q9BYV2 Y_RNA.617-201ENST00000410920 90 ntBASIC1.21□□□□□ -2.22
TRIM54Q9BYV2 RPL39P25-201ENST00000449384 154 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms