Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-228P-201ENST00000362700 106 ntBASIC-2.29□□□□□ -2.78
SCAPERQ9BY12 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.29□□□□□ -2.78
SCAPERQ9BY12 AL160004.2-201ENST00000432935 350 ntBASIC-2.29□□□□□ -2.78
SCAPERQ9BY12 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-2.29□□□□□ -2.78
SCAPERQ9BY12 AC007012.1-201ENST00000567192 175 ntBASIC-2.29□□□□□ -2.78
SCAPERQ9BY12 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-2.29□□□□□ -2.78
SCAPERQ9BY12 AC024933.1-201ENST00000608472 348 ntBASIC-2.29□□□□□ -2.78
SCAPERQ9BY12 RNU6-1260P-201ENST00000362944 107 ntBASIC-2.3□□□□□ -2.78
SCAPERQ9BY12 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.3□□□□□ -2.78
SCAPERQ9BY12 Y_RNA.454-201ENST00000384224 113 ntBASIC-2.3□□□□□ -2.78
SCAPERQ9BY12 RNU7-195P-201ENST00000458793 62 ntBASIC-2.3□□□□□ -2.78
SCAPERQ9BY12 MIR2113-201ENST00000459007 91 ntBASIC-2.3□□□□□ -2.78
SCAPERQ9BY12 AC091951.2-201ENST00000500762 203 ntBASIC-2.3□□□□□ -2.78
SCAPERQ9BY12 UBE2V2P2-201ENST00000587677 504 ntBASIC-2.3□□□□□ -2.78
SCAPERQ9BY12 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-2.3□□□□□ -2.78
SCAPERQ9BY12 Y_RNA.72-201ENST00000362894 103 ntBASIC-2.31□□□□□ -2.78
SCAPERQ9BY12 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.31□□□□□ -2.78
SCAPERQ9BY12 MIR548I2-201ENST00000408348 149 ntBASIC-2.31□□□□□ -2.78
SCAPERQ9BY12 AC024067.1-201ENST00000426199 223 ntBASIC-2.31□□□□□ -2.78
SCAPERQ9BY12 RNU6-893P-201ENST00000458841 100 ntBASIC-2.31□□□□□ -2.78
SCAPERQ9BY12 RNU6-1270P-201ENST00000517128 108 ntBASIC-2.31□□□□□ -2.78
SCAPERQ9BY12 AC068339.1-201ENST00000526965 141 ntBASIC-2.31□□□□□ -2.78
SCAPERQ9BY12 AL138960.2-201ENST00000625145 535 ntBASIC-2.31□□□□□ -2.78
SCAPERQ9BY12 RNU6-874P-201ENST00000362390 105 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 RNU4-80P-201ENST00000363200 141 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 RNU4-20P-201ENST00000365601 151 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 RNU7-141P-201ENST00000459304 62 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 SNORD42A-201ENST00000459584 64 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 AL158211.2-201ENST00000607282 395 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 DLEU2_5.2-201ENST00000610606 84 ntBASIC-2.32□□□□□ -2.78
SCAPERQ9BY12 RNU6-365P-201ENST00000517113 106 ntBASIC-2.33□□□□□ -2.78
SCAPERQ9BY12 MIR2355-201ENST00000517199 87 ntBASIC-2.33□□□□□ -2.78
SCAPERQ9BY12 AC024909.2-201ENST00000553035 286 ntBASIC-2.33□□□□□ -2.78
SCAPERQ9BY12 MTATP6P24-201ENST00000576835 677 ntBASIC-2.33□□□□□ -2.78
SCAPERQ9BY12 AC005357.1-201ENST00000588399 301 ntBASIC-2.33□□□□□ -2.78
SCAPERQ9BY12 AC091932.4-201ENST00000623386 200 ntBASIC-2.33□□□□□ -2.78
SCAPERQ9BY12 AC021613.1-201ENST00000623880 111 ntBASIC-2.33□□□□□ -2.78
SCAPERQ9BY12 RNU6-626P-201ENST00000363354 107 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 RNU6-312P-201ENST00000364629 107 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 RNU6-20P-201ENST00000384106 107 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 AC083904.1-201ENST00000487828 231 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 RNU6-126P-201ENST00000516685 103 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 AL008718.3-201ENST00000610217 321 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 SNORA51.5-201ENST00000384126 131 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 RNU6-297P-201ENST00000384636 107 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 AC245505.1-201ENST00000556398 224 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 MIR4500-201ENST00000579472 76 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 AL049861.1-201ENST00000603130 150 ntBASIC-2.34□□□□□ -2.78
SCAPERQ9BY12 RNU6-571P-201ENST00000384128 107 ntBASIC-2.35□□□□□ -2.79
SCAPERQ9BY12 SNORD115-47-201ENST00000391226 86 ntBASIC-2.35□□□□□ -2.79
SCAPERQ9BY12 SNORD63B-201ENST00000411005 70 ntBASIC-2.35□□□□□ -2.79
SCAPERQ9BY12 RNU6-592P-201ENST00000411333 103 ntBASIC-2.35□□□□□ -2.79
SCAPERQ9BY12 SNORD77.4-201ENST00000516158 81 ntBASIC-2.35□□□□□ -2.79
SCAPERQ9BY12 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.35□□□□□ -2.79
SCAPERQ9BY12 RNU7-137P-201ENST00000516788 62 ntBASIC-2.35□□□□□ -2.79
SCAPERQ9BY12 AL021707.8-201ENST00000609428 183 ntBASIC-2.35□□□□□ -2.79
SCAPERQ9BY12 SNORD113-6-201ENST00000363345 75 ntBASIC-2.36□□□□□ -2.79
SCAPERQ9BY12 SNORA53-201ENST00000391141 249 ntBASIC-2.36□□□□□ -2.79
SCAPERQ9BY12 RNU2-72P-201ENST00000411175 163 ntBASIC-2.36□□□□□ -2.79
SCAPERQ9BY12 MTND3P16-201ENST00000452205 344 ntBASIC-2.36□□□□□ -2.79
SCAPERQ9BY12 ELOCP32-201ENST00000548625 324 ntBASIC-2.36□□□□□ -2.79
SCAPERQ9BY12 SNORD114-10-201ENST00000363409 72 ntBASIC-2.37□□□□□ -2.79
SCAPERQ9BY12 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2.37□□□□□ -2.79
SCAPERQ9BY12 MIR3913-1-201ENST00000577744 102 ntBASIC-2.37□□□□□ -2.79
SCAPERQ9BY12 MIR376A2-201ENST00000636782 80 ntBASIC-2.37□□□□□ -2.79
SCAPERQ9BY12 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.38□□□□□ -2.79
SCAPERQ9BY12 RNU6-164P-201ENST00000364604 103 ntBASIC-2.38□□□□□ -2.79
SCAPERQ9BY12 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.38□□□□□ -2.79
SCAPERQ9BY12 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.38□□□□□ -2.79
SCAPERQ9BY12 AL157392.4-201ENST00000609756 345 ntBASIC-2.38□□□□□ -2.79
SCAPERQ9BY12 Y_RNA.215-201ENST00000364204 112 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 Y_RNA.230-201ENST00000364348 109 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 SNORA62.4-201ENST00000365504 151 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 RNU6-746P-201ENST00000384112 109 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 RNU6-306P-201ENST00000384617 107 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 AL078595.1-201ENST00000404458 226 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 RNU6-248P-201ENST00000410720 107 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 RNU6-118P-201ENST00000516552 102 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.39□□□□□ -2.79
SCAPERQ9BY12 RNA5SP26-201ENST00000362406 119 ntBASIC-2.4□□□□□ -2.79
SCAPERQ9BY12 SNORA72.4-201ENST00000384174 132 ntBASIC-2.4□□□□□ -2.79
SCAPERQ9BY12 RNU6-906P-201ENST00000384700 70 ntBASIC-2.4□□□□□ -2.79
SCAPERQ9BY12 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.4□□□□□ -2.79
SCAPERQ9BY12 AC108019.1-201ENST00000512540 175 ntBASIC-2.4□□□□□ -2.79
SCAPERQ9BY12 SNORD67.1-201ENST00000516618 108 ntBASIC-2.4□□□□□ -2.79
SCAPERQ9BY12 RNU6-522P-201ENST00000364497 107 ntBASIC-2.41□□□□□ -2.79
SCAPERQ9BY12 RNU6-144P-201ENST00000383951 107 ntBASIC-2.41□□□□□ -2.79
SCAPERQ9BY12 MIR487B-201ENST00000385021 84 ntBASIC-2.41□□□□□ -2.79
SCAPERQ9BY12 MIR514A2-201ENST00000385131 88 ntBASIC-2.41□□□□□ -2.79
SCAPERQ9BY12 MIR514A3-201ENST00000385132 88 ntBASIC-2.41□□□□□ -2.79
SCAPERQ9BY12 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.41□□□□□ -2.79
SCAPERQ9BY12 RNU6-1258P-201ENST00000516911 111 ntBASIC-2.41□□□□□ -2.79
SCAPERQ9BY12 AC011476.5-201ENST00000615594 130 ntBASIC-2.41□□□□□ -2.79
SCAPERQ9BY12 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-2.42□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 426.9 ms