Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RNU6-240P-201ENST00000516098 97 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 Y_RNA.757-201ENST00000578934 114 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 SNORA22.1-201ENST00000362701 134 ntBASIC1.18□□□□□ -2.22
PAAF1Q9BRP4 SNORD113.3-201ENST00000364630 78 ntBASIC1.18□□□□□ -2.22
PAAF1Q9BRP4 RNU6-994P-201ENST00000410507 111 ntBASIC1.18□□□□□ -2.22
PAAF1Q9BRP4 AL022718.1-201ENST00000412004 84 ntBASIC1.18□□□□□ -2.22
PAAF1Q9BRP4 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
PAAF1Q9BRP4 RNU6-113P-201ENST00000516653 101 ntBASIC1.18□□□□□ -2.22
PAAF1Q9BRP4 AC133485.4-201ENST00000561835 220 ntBASIC1.18□□□□□ -2.22
PAAF1Q9BRP4 AC138907.4-201ENST00000570107 226 ntBASIC1.18□□□□□ -2.22
PAAF1Q9BRP4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 RNU6-349P-201ENST00000362402 107 ntBASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 RNU6-508P-201ENST00000363231 103 ntBASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 RNU6-774P-201ENST00000363238 107 ntBASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 SNORD111-201ENST00000408139 94 ntBASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 RNU7-62P-201ENST00000458856 62 ntBASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 SNORA4-201ENST00000584302 138 ntBASIC1.17□□□□□ -2.22
PAAF1Q9BRP4 Y_RNA.430-201ENST00000384081 110 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 MIR548M-201ENST00000408260 86 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 AC244023.1-201ENST00000426884 112 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 AC067940.1-201ENST00000458411 300 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 Y_RNA.703-201ENST00000516846 111 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 AC036111.3-201ENST00000526389 112 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 MIR3133-201ENST00000583157 78 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 AC242498.1-201ENST00000604134 111 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 AC021443.1-201ENST00000604478 211 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 AP001340.1-201ENST00000624405 217 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 AC010332.2-201ENST00000613083 1904 ntBASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PAAF1Q9BRP4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 MIR518E-201ENST00000385252 88 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 SNORD12C-201ENST00000386307 89 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 AC106800.4-201ENST00000614905 153 ntBASIC1.15□□□□□ -2.23
PAAF1Q9BRP4 MIR377-201ENST00000362145 69 ntBASIC1.14□□□□□ -2.23
PAAF1Q9BRP4 MIR588-201ENST00000384900 83 ntBASIC1.14□□□□□ -2.23
PAAF1Q9BRP4 SNORA40-201ENST00000388090 126 ntBASIC1.14□□□□□ -2.23
PAAF1Q9BRP4 RNA5SP237-201ENST00000410414 113 ntBASIC1.14□□□□□ -2.23
PAAF1Q9BRP4 RNU7-113P-201ENST00000459273 62 ntBASIC1.14□□□□□ -2.23
PAAF1Q9BRP4 Y_RNA.651-201ENST00000459380 103 ntBASIC1.14□□□□□ -2.23
PAAF1Q9BRP4 MIR4305-201ENST00000583252 102 ntBASIC1.14□□□□□ -2.23
PAAF1Q9BRP4 U7.2-201ENST00000607576 63 ntBASIC1.14□□□□□ -2.23
PAAF1Q9BRP4 RNU6-746P-201ENST00000384112 109 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 Y_RNA.568-201ENST00000384742 113 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 MIR942-201ENST00000401111 86 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 RNA5SP144-201ENST00000410846 116 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 RPL39P25-201ENST00000449384 154 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 RNU7-164P-201ENST00000459221 62 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 RPS29P1-201ENST00000465274 159 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 MIR3121-201ENST00000579680 77 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 RNU6-94P-201ENST00000607728 107 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 TUG1_4.1-201ENST00000619464 181 ntBASIC1.13□□□□□ -2.23
PAAF1Q9BRP4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PAAF1Q9BRP4 POLR2J4-204ENST00000418424 324 ntBASIC1.12□□□□□ -2.23
PAAF1Q9BRP4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.12□□□□□ -2.23
PAAF1Q9BRP4 snoU13.2-201ENST00000459201 104 ntBASIC1.12□□□□□ -2.23
PAAF1Q9BRP4 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
PAAF1Q9BRP4 AL137067.1-201ENST00000615933 120 ntBASIC1.12□□□□□ -2.23
PAAF1Q9BRP4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 Y_RNA.114-201ENST00000363265 113 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 Y_RNA.294-201ENST00000364916 102 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 Y_RNA.366-201ENST00000365540 102 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 MIR200A-201ENST00000384875 90 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 MIR489-201ENST00000384923 84 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 AC113410.1-201ENST00000505029 247 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 MIR6740-201ENST00000618268 113 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 MIR6841-201ENST00000637129 72 ntBASIC1.11□□□□□ -2.23
PAAF1Q9BRP4 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
PAAF1Q9BRP4 RNU6-934P-201ENST00000365154 107 ntBASIC1.1□□□□□ -2.23
PAAF1Q9BRP4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.1□□□□□ -2.23
PAAF1Q9BRP4 MTND4LP9-201ENST00000427694 174 ntBASIC1.1□□□□□ -2.23
PAAF1Q9BRP4 FABP5P4-201ENST00000437203 171 ntBASIC1.1□□□□□ -2.23
PAAF1Q9BRP4 SNORD124-201ENST00000459577 104 ntBASIC1.1□□□□□ -2.23
PAAF1Q9BRP4 RMST_2.1-201ENST00000617263 136 ntBASIC1.1□□□□□ -2.23
PAAF1Q9BRP4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.1□□□□□ -2.23
PAAF1Q9BRP4 RNU6-647P-201ENST00000364243 107 ntBASIC1.09□□□□□ -2.23
PAAF1Q9BRP4 RNU6-580P-201ENST00000365159 107 ntBASIC1.09□□□□□ -2.23
PAAF1Q9BRP4 SNORA18-201ENST00000384416 132 ntBASIC1.09□□□□□ -2.23
PAAF1Q9BRP4 RNU6-257P-201ENST00000410238 98 ntBASIC1.09□□□□□ -2.23
PAAF1Q9BRP4 SNORD83.1-201ENST00000411362 77 ntBASIC1.09□□□□□ -2.23
PAAF1Q9BRP4 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
PAAF1Q9BRP4 RNU6-1211P-201ENST00000459179 105 ntBASIC1.09□□□□□ -2.23
PAAF1Q9BRP4 RNA5SP33-201ENST00000516687 98 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms