Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 RNU6-238P-201ENST00000363313 106 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.574-201ENST00000384766 95 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 MIR193B-201ENST00000384907 83 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 MTATP8P1-201ENST00000467115 207 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 RNU6-1153P-201ENST00000516760 105 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 RNU7-70P-201ENST00000516941 66 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 AL442067.1-201ENST00000613261 223 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 MIR8066-201ENST00000617280 78 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 MIR6841-201ENST00000637129 72 ntBASIC0.22□□□□□ -2.37
KLHDC3Q9BQ90 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 SNORD118-201ENST00000363593 134 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-472P-201ENST00000384299 107 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-469P-201ENST00000516253 101 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 SNORD116-25-201ENST00000516517 92 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 AP003072.1-201ENST00000531740 145 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 MIR924-201ENST00000638017 53 ntBASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.21□□□□□ -2.38
KLHDC3Q9BQ90 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.466-201ENST00000384294 113 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-1160P-201ENST00000384546 104 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 RNY1P4-201ENST00000384595 115 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.540-201ENST00000384638 111 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 MIR548F4-201ENST00000408515 105 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 SEPT7P4-201ENST00000437076 306 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 AC133485.4-201ENST00000561835 220 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 MIR4744-201ENST00000581563 82 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 AC021613.1-201ENST00000623880 111 ntBASIC0.2□□□□□ -2.38
KLHDC3Q9BQ90 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 SNORA22.1-201ENST00000362701 134 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 SNORD114-26-201ENST00000363543 72 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-978P-201ENST00000364371 103 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-597P-201ENST00000365620 102 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 RNA5SP127-201ENST00000411051 133 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 AL121914.1-201ENST00000450188 156 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-765P-201ENST00000516916 99 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 AC141846.1-201ENST00000568348 142 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 MIR378D2-201ENST00000580636 98 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 AC011921.3-201ENST00000605540 361 ntBASIC0.19□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.54-201ENST00000362766 105 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.292-201ENST00000364904 97 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.515-201ENST00000384535 112 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 U8.15-201ENST00000390947 134 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 MIR548H3-201ENST00000408771 118 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 AL512326.2-201ENST00000426359 151 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-893P-201ENST00000458841 100 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-135P-201ENST00000516769 101 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 MIR4643-201ENST00000577473 78 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 MIR1273G-201ENST00000577677 100 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 MIR6082-201ENST00000613604 109 ntBASIC0.18□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.13-201ENST00000362403 112 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.76-201ENST00000362931 109 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.85-201ENST00000363014 111 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-403P-201ENST00000363163 104 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 RNA5SP62-201ENST00000363457 110 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-1099P-201ENST00000363533 107 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.174-201ENST00000363781 105 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.277-201ENST00000364754 102 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.326-201ENST00000365176 113 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-949P-201ENST00000384040 107 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 MIR624-201ENST00000385217 97 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 MIR6718-201ENST00000616153 80 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.396-201ENST00000383949 103 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 RNU6-578P-201ENST00000390980 103 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.588-201ENST00000391254 102 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.617-201ENST00000410920 90 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 RNU5E-9P-201ENST00000411164 104 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 RNA5SP480-201ENST00000516840 109 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 SCARNA15-202ENST00000516881 127 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 AL117187.1-201ENST00000555482 181 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
KLHDC3Q9BQ90 Y_RNA.121-201ENST00000363309 113 ntBASIC0.15□□□□□ -2.39
KLHDC3Q9BQ90 SNORA36.1-201ENST00000363424 132 ntBASIC0.15□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.145-201ENST00000363527 102 ntBASIC0.15□□□□□ -2.39
KLHDC3Q9BQ90 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
KLHDC3Q9BQ90 MIR4491-201ENST00000581087 68 ntBASIC0.15□□□□□ -2.39
KLHDC3Q9BQ90 SNORA63-201ENST00000363450 132 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.476-201ENST00000384347 108 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 SNORA18-201ENST00000384416 132 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 MIR606-201ENST00000384851 96 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 MIR644A-201ENST00000385262 94 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 RNU2-38P-201ENST00000410856 79 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 RNU6-1086P-201ENST00000410930 100 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 AC096949.1-201ENST00000412047 152 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 MTND1P19-201ENST00000511780 315 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.797-201ENST00000515977 94 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 474.3 ms