Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 7SK.11-201ENST00000615477 250 ntBASIC1.61□□□□□ -2.15
HIST1H2AJQ99878 7SK.13-201ENST00000622040 250 ntBASIC1.61□□□□□ -2.15
HIST1H2AJQ99878 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
HIST1H2AJQ99878 Y_RNA.281-201ENST00000364774 94 ntBASIC1.6□□□□□ -2.15
HIST1H2AJQ99878 RNU6-396P-201ENST00000365369 105 ntBASIC1.6□□□□□ -2.15
HIST1H2AJQ99878 RNU6-1237P-201ENST00000384777 107 ntBASIC1.6□□□□□ -2.15
HIST1H2AJQ99878 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.6□□□□□ -2.15
HIST1H2AJQ99878 RNU6-902P-201ENST00000517212 91 ntBASIC1.6□□□□□ -2.15
HIST1H2AJQ99878 MIR4679-2-201ENST00000578358 77 ntBASIC1.6□□□□□ -2.15
HIST1H2AJQ99878 Y_RNA.773-201ENST00000607168 90 ntBASIC1.6□□□□□ -2.15
HIST1H2AJQ99878 Y_RNA.85-201ENST00000363014 111 ntBASIC1.59□□□□□ -2.15
HIST1H2AJQ99878 AC048334.1-201ENST00000477975 159 ntBASIC1.59□□□□□ -2.15
HIST1H2AJQ99878 MIR6516-201ENST00000630554 81 ntBASIC1.59□□□□□ -2.15
HIST1H2AJQ99878 AL589743.1-201ENST00000551932 2712 ntBASIC1.59□□□□□ -2.16
HIST1H2AJQ99878 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 RNU6-654P-201ENST00000364373 107 ntBASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 RNU6-1107P-201ENST00000364817 104 ntBASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 MIR504-201ENST00000385065 83 ntBASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 MIR1261-201ENST00000408659 82 ntBASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 PDCD5P2-201ENST00000507570 312 ntBASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 RNU6-412P-201ENST00000516434 106 ntBASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 MIR1255B1-201ENST00000636325 63 ntBASIC1.58□□□□□ -2.16
HIST1H2AJQ99878 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 SNORD115-19-201ENST00000363098 82 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 SNORD115-18-201ENST00000363293 82 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 SNORD115-17-201ENST00000364612 82 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 RNU6-616P-201ENST00000384353 107 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 RNU6-205P-201ENST00000390858 107 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 MIR1289-2-201ENST00000408360 111 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 RNA5SP95-201ENST00000410319 137 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 MTATP6P29-201ENST00000415057 132 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 SNORA31.2-201ENST00000516019 134 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 MIR2115-201ENST00000516657 100 ntBASIC1.57□□□□□ -2.16
HIST1H2AJQ99878 SNORD77B-201ENST00000391112 67 ntBASIC1.56□□□□□ -2.16
HIST1H2AJQ99878 RNU6-1054P-201ENST00000411293 104 ntBASIC1.56□□□□□ -2.16
HIST1H2AJQ99878 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
HIST1H2AJQ99878 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.56□□□□□ -2.16
HIST1H2AJQ99878 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
HIST1H2AJQ99878 uc_338.28-201ENST00000612082 187 ntBASIC1.56□□□□□ -2.16
HIST1H2AJQ99878 Y_RNA.116-201ENST00000363292 103 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 RNU6-755P-201ENST00000364400 103 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 U8.6-201ENST00000364939 135 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 snoU13.2-201ENST00000459201 104 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 RNU7-35P-201ENST00000517174 62 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 AP000753.3-201ENST00000604083 169 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 MIR6740-201ENST00000618268 113 ntBASIC1.55□□□□□ -2.16
HIST1H2AJQ99878 Y_RNA.363-201ENST00000365529 113 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 MIR588-201ENST00000384900 83 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 RNU6-816P-201ENST00000390914 107 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 RNU6-1268P-201ENST00000391214 107 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 RNU6-1239P-201ENST00000391310 107 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 RNA5SP237-201ENST00000410414 113 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 RNU6-1086P-201ENST00000410930 100 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 RPL39P34-201ENST00000477141 156 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 RNU7-79P-201ENST00000516082 62 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 RNU11-2P-201ENST00000516898 142 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 AC068339.1-201ENST00000526965 141 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 MIR4264-201ENST00000583520 66 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 AL162726.3-218ENST00000636401 95 ntBASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HIST1H2AJQ99878 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 Y_RNA.49-201ENST00000362714 112 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 RNU6-153P-201ENST00000364422 104 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 RNU6-1014P-201ENST00000383940 103 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 MT-TN-201ENST00000387400 73 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 RNU6-613P-201ENST00000410412 108 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 RPL39P25-201ENST00000449384 154 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 RNU6-548P-201ENST00000517083 115 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 uc_338.6-201ENST00000613544 171 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 AL662814.1-201ENST00000617364 121 ntBASIC1.53□□□□□ -2.16
HIST1H2AJQ99878 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.17
HIST1H2AJQ99878 Y_RNA.309-201ENST00000365046 111 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 Y_RNA.330-201ENST00000365230 109 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 RNU6-106P-201ENST00000384405 107 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 SNORA75.2-201ENST00000391138 150 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 SNORA75.3-201ENST00000391231 150 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 RNU6-554P-201ENST00000410466 106 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 RNU7-62P-201ENST00000458856 62 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 SNORD67.1-201ENST00000516618 108 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 AC141846.1-201ENST00000568348 142 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 MIR5009-201ENST00000578736 100 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 FAM71BP1-201ENST00000604431 523 ntBASIC1.52□□□□□ -2.17
HIST1H2AJQ99878 RNU4-67P-201ENST00000364569 141 ntBASIC1.51□□□□□ -2.17
HIST1H2AJQ99878 RNY1P13-201ENST00000365030 105 ntBASIC1.51□□□□□ -2.17
HIST1H2AJQ99878 Y_RNA.323-201ENST00000365157 109 ntBASIC1.51□□□□□ -2.17
HIST1H2AJQ99878 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
HIST1H2AJQ99878 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.51□□□□□ -2.17
HIST1H2AJQ99878 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
HIST1H2AJQ99878 SEPT14P17-201ENST00000617978 177 ntBASIC1.51□□□□□ -2.17
HIST1H2AJQ99878 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
HIST1H2AJQ99878 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
HIST1H2AJQ99878 MIR450A1-201ENST00000362262 91 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms